Gene Smal_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1172 
Symbol 
ID6475024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1333238 
End bp1334425 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID642730337 
ProductABC-2 type transporter 
Protein accessionYP_002027560 
Protein GI194364950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAG CACTGAGCCC TGGCCGCGGC GGCTTCGCTG CCAGCTGGCG GCGCGAGCTG 
CGGTCGCTGC GCGGCAACCG CGCCGACCTG CTGCTGGTCA CCCTGCTGCC GCTGCTGATG
CTGGCCGTGA TGGCGTGGAT GTTCACGCCC TCGGTGATGC GCGACATCCC GATCGCCGTG
GTCGACCTCG ACCACAGCAG TGACAGCCGC CTGCTGCTGC GCATGCTCGA TGCCAGCCCC
GGCGTGCGCA TCGCCAGCCA GCCTGCGGAC ATGCAGGACG CACGTTCGCA GCTGCGTCGG
CTGGATGTGT TCGCCATCGT GCTGGTGCCG CGCGATGTCA CCCGGCAGGC GTTGCGTGGG
CGCCAGGGCA CGGTGTTCGC CTATTACAAC GCCACTTACA TGACCACCGG ACAGTCCGCT
GCGCGCGATA TCGGCGACGC GGTCTCGGCC TGGAATGCGC GCCTGCTGCG CGAGCGCATC
GGCCTGCAGG TCGGCCCGGG CAAGCTGCGT GCCGCGCCGA TCGCGGTGCA GTCAGACATC
CTCTACAACC CGGCGCGCAG CTACGAACTG TTCCTGCTGC CGCTGATCTT CCCGGCGGTG
CTGTCACTGG TACTGGCGCT TGCGGTGGCC GGCAGCCTCG GCCGCGAAAT CCGCGACAGC
ACCCTGCCCG CCTGGCTGGG CCGCACGCCG TGGCCGGCGA TTGCCGGCAA GGTCGCGCCG
TACATCCTGC TGTTCTCGGT GTATGGCGCA CTCGGCATCG GCTACCTCGC CTGGCTGCGC
GGCGATGGCG TGGCGGGCAG CGTGCTCATG CTGCTGCTCG CACAACCCTT GTTCTATCTG
GCTACCGCCG CCTACGCGCT GTTCTTCGTC GGCGTCACCC GCGACATGGG CACCGCACTG
TCTGCGGTCG GCCTCAGTAT CGGCACCGCG CTGGCGTTCT CCAGCGCCAC CTTCCCGGTG
CTGGACGGCC CGTTGTTCAC CCGCATCTGG CACCAGCTGC TGCCATTGAG CGCCTACATC
AAGCTGCAGA CCCAGCAACA GTTCATCGGT TCGCCGCTGC AGGTTTCGGT ATGGCCGCTG
GCCACGTTGC TGCTGATGTC AGTGGTGGCT GGCGGCATCG GTGGCCTGCG CCTGATTGCC
TTCGCGCGCA CGCCCGAAGC CGCACAACCG GCAGGAGCCG ACGCATGA
 
Protein sequence
MAPALSPGRG GFAASWRREL RSLRGNRADL LLVTLLPLLM LAVMAWMFTP SVMRDIPIAV 
VDLDHSSDSR LLLRMLDASP GVRIASQPAD MQDARSQLRR LDVFAIVLVP RDVTRQALRG
RQGTVFAYYN ATYMTTGQSA ARDIGDAVSA WNARLLRERI GLQVGPGKLR AAPIAVQSDI
LYNPARSYEL FLLPLIFPAV LSLVLALAVA GSLGREIRDS TLPAWLGRTP WPAIAGKVAP
YILLFSVYGA LGIGYLAWLR GDGVAGSVLM LLLAQPLFYL ATAAYALFFV GVTRDMGTAL
SAVGLSIGTA LAFSSATFPV LDGPLFTRIW HQLLPLSAYI KLQTQQQFIG SPLQVSVWPL
ATLLLMSVVA GGIGGLRLIA FARTPEAAQP AGADA