Gene Smal_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1171 
Symbol 
ID6475023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1332114 
End bp1333241 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content68% 
IMG OID642730336 
Producthypothetical protein 
Protein accessionYP_002027559 
Protein GI194364949 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TGTGGCGCAG CCTGCGGCAG ACCCTGATGG CGGTGCTGTG CGACCGCTAT 
GCGATCGTGG TGATGGTCGG CGCGGTGATC CTGTATTCGT TCTTCTACCC GGCCGCATAC
CGCCACCAGG TGGCCGGCAA CCTGCCGGTG CTGGTGGTGG ATGAAGACCA CAGCGCGACC
AGCCGCGAAC TGCTGCGCAA GCTCGATGCG CTGCGGGTCG CGCGCGTGGT CGGGCAACCG
GCCGACATCG ACAGCGCACG CCAACAGCTG GAAGCCGGCC ACGCCGAAGG CATCGTGCTG
ATCCCGGCCA ACCTGGAGCG CGACATCCTG CGCGGCCATC CTGCCAAGCT GGTGCTGCTC
GGCAACGGTG CCTACCTGGG CCGCGCCAGC TGGGTGCTGG GCAGCGTGGC CGATGCACTG
GGTGCCTTCG GACGTGAGGC CGTGGTCGGC CAGGCCGCCT TCATGGGCGC GCCGCAGGCA
CCACCGGTCA CCCTGGTGCA GCGCCCGCTG TACAACACCC AGGAAGGCTA CGGCAGCGCT
ATCGTGCCCG GCGTGGCCGA GCTGATCGTG CAACAGACGC TGCTGATGGG CATCGGCGTC
CTGCTCGGCG GCCGCCGCCT CGCACTCGGC CGGCGCCTGC GCTTCGACCT GCCGACTTTG
GCGGGCATGG CATTGGGCTT CGGCCTGATC GGACTGTTCG GCTTGTTCTA CTACGCCGGT
TTCACCGCCT GGGTGCAGGA CTATCCGCGC GGCGGCAACC CGCTGGGCCA GCTGCTGGGC
GGCACCCTGT TCATCGCCGC CACGGTGGCG TTCGGCCTGT TCGTCGGCAG CTTCTTCCGC
ACCCGCGAAC GCGCCTTCCA GTACATCATC GCCACCTCGA TCCCGCTGTT CTTCCTGGCC
AACCTGTCGT GGCCGGCAGT GATGACGCCA CAACCGCTGG TCTGGCTGGC GCAGCTGTTG
CCGACCACCT CCGGCATCAA CCTGATGGTG CGCCTGAACC AGATGGACGC CAGCCTGGCC
GAAGTCAGCC ATGAACTGAT CACCCTCAGC GCCCTGCTGC TGCTCTACGG TGCCCTCGCC
GCCTGGCGCC TCCTCGCAAA AAAGGGGACG GAGGGGATTA AGTCGTAA
 
Protein sequence
MSALWRSLRQ TLMAVLCDRY AIVVMVGAVI LYSFFYPAAY RHQVAGNLPV LVVDEDHSAT 
SRELLRKLDA LRVARVVGQP ADIDSARQQL EAGHAEGIVL IPANLERDIL RGHPAKLVLL
GNGAYLGRAS WVLGSVADAL GAFGREAVVG QAAFMGAPQA PPVTLVQRPL YNTQEGYGSA
IVPGVAELIV QQTLLMGIGV LLGGRRLALG RRLRFDLPTL AGMALGFGLI GLFGLFYYAG
FTAWVQDYPR GGNPLGQLLG GTLFIAATVA FGLFVGSFFR TRERAFQYII ATSIPLFFLA
NLSWPAVMTP QPLVWLAQLL PTTSGINLMV RLNQMDASLA EVSHELITLS ALLLLYGALA
AWRLLAKKGT EGIKS