Gene Smal_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1170 
Symbol 
ID6475022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1331632 
End bp1331994 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID642730335 
Product17 kDa surface antigen 
Protein accessionYP_002027558 
Protein GI194364948 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT CGACCCGATT GCTTGTGCTG GGCACCCTGC TGGCGGCTTC GTCGGTGGCC 
GGCGCGCAGA CGTATGGGCC GCGCGATGAG GGACGCAAGT TCAACGACGG CAGCCGCGTG
GTCTGCAAGA ACGTGGAAGT GCAGCGCAAC TCGCGCGATC CCAACCGCAT TACGGGTACC
GCTACCGGCG CCGTGATCGG TGGCCTGCTC GGCAACCAGG TGGGCGGCGG CAACGGCAAG
AAGCTGGCCA CCGTGGCAGG CGCCGTCGCC GGTGGTGCAG CCGGGCGCCA GATCCAGGGC
AACAGTCAGC AGAAGAATGG TGATCGCGTC GTCGAACGTC GCTGCGAGCG CGTCTACCGC
TGA
 
Protein sequence
MKTSTRLLVL GTLLAASSVA GAQTYGPRDE GRKFNDGSRV VCKNVEVQRN SRDPNRITGT 
ATGAVIGGLL GNQVGGGNGK KLATVAGAVA GGAAGRQIQG NSQQKNGDRV VERRCERVYR