Gene Smal_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1166 
Symbol 
ID6475018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1325263 
End bp1327854 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content67% 
IMG OID642730331 
ProductDNA mismatch repair protein MutS 
Protein accessionYP_002027554 
Protein GI194364944 
COG category[L] Replication, recombination and repair 
COG ID[COG0249] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01070] DNA mismatch repair protein MutS 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG AAAAGTCCGC CGAACACACC CCGCTGATGA AGCAGTTCTT CGCAGCCAAG 
TCCGAGTACC CGGACCTGCT GCTGTTCTTC CGCATGGGCG ACTTCTACGA GCTGTTCTAC
GACGACGCGC GCAAGGCCGC GCGCCTGCTC GACATCACCC TGACCCAGCG CGGCAGCTCC
GGCGGCGCGC CGATCCCGAT GGCCGGCGTG CCGGTGCATG CTTACGAGGG CTACCTGGCC
CGCCTGGTGG CTCTGGGTGA ATCGGTGGCG ATCTGCGAAC AGATCGGCGA TCCGGCGCTG
GCCAAGGGCC TGGTCGAACG CAAGGTGGTG CGCATCGTCA CCCCCGGCAC CGTCACCGAC
GAGGCGCTGC TGGACGAACG CCGCGACACC CTGCTGATGA CGCTGTCGCG CAGCAAGCAG
GGCTACGGCC TGGCCTGGGC CGACCTGGCC GGCGGACGCT TCCTGGTCAA CGAAGTGGAT
ACCGATGATG CGCTGGAGGC CGAACTGGCA CGCCTGGAGC CGGCCGAGCT GCTGGTGCCC
GATGAGGAGA ACTGGCCCGA GTTCCTGCGC CAGCGCAGTG GCGTGCGCCG CCGCGCGCCG
TGGCTGTTCG ACGCCGACAG TGGTCGTCGC CAGCTGCTGA ACTTCTTCAA GCTGCACGAT
CTCAGCGGTT TCGGCATCGA TGACAAGCCA CGTGCCACCG CTGCTGCCGG CGCCCTGCTG
GGCTATGTGG AAGAAACCCA GAAGCAGCGC CTGCCGCACC TCACCTCCAT CTCGATGGAA
ACCGCCGGCG AAGCGATCGC GATGAACGCG GCAACGCGTC GCCACCTGGA ACTGGATACA
CGTGTCGACG GTGATACCCG CAACACCCTG CTCGGTGTGC TCGACAGTAC GGTAACGCCG
ATGGGCGGCC GCCTGCTGCG CCGCTGGCTG CATCGCCCGC TGCGCCTGCG CGAAGTCCTG
GTGCAGCGCC ACCACGCGGT GGAAACGCTG ATCGATCGCG GCAGCGACGC CGACATCCGC
GAGCAGTTCC GTCGCCTTGG CGATCTTGAA CGCATCCTCA CCCGCGTCGC GCTGCGCTCG
GCACGACCGC GCGATTTCTC CACCCTGCGC GATGGCCTGG GCCTGCTGCC GGCCGTGCGC
GAGGTGCTGG CACCGCTGGA TTCGCCGCGC CTGCAGACCC TGCATGCCGC ACTTGGCGAG
CACGACGAAT GCGCGCATCT GCTGGCCAGC GCCATCGCCG AAATGCCACC GCTCAAGCTC
AGCGATGGCG GCGTACTGGC CGACGGTTTC GATGCCGAGC TGGATGAACT GCGGCGGCTG
TCGACCCACG CCGACCAGTT CCTGGTCGAT CTGGAACAGC GCGAGCGCGA GAGCAGCGGC
ATCGCCACGC TGAAGGTCGG CTACAACCGC GTGCACGGCT ACTACATCGA AATCAGCAAG
GGCCAGTCCG AGCGCGCGCC GGTGCATTAC ACCCGCCGGC AGACGCTGAC CAACGCCGAG
CGCTACATCA CCGAAGAACT GAAGGCGTTC GAGGACAAGG TGCTGTCCGC GCGCGACCGC
TCGCTGTCGC GAGAGAAGTA CCTGTACGAG CAGTTGCTGG ATACCCTCGG CACACAGCTG
GAACCGCTCA AGCAATGCGC TGCCGCGCTG AGTGAACTGG ACGTGCTGGC CGCCTTCGCC
GAACGCGCGC AGGCGCTGGA CTGGGCGCGC CCGGAACTGC AGGCCGAGCC GTGCCTGAAG
ATCGAACGCG GCCGCCATCC GGTAGTGGAA GCGGTGCGCG ACCAGCCGTT CGAGCCGAAC
GACCTGGACC TGCATCCGGA CCGTCGCATG CTGGTCATCA CCGGCCCCAA CATGGGCGGT
AAATCAACCT ACATGCGGCA GAACGCGCTG ATCGTGCTGC TGGCCCACAT CGGCAGCTTC
GTGCCGGCCA GCCGTGCGCT GATCGGACCG ATCGACCGCA TCCTGACCCG CATCGGCGCC
GGTGATGATC TGGCCCGTGG GCAGTCCACC TTCATGGTCG AGATGGCCGA GACCAGCTAC
ATCCTGCATC ACGCCACCGC GCACTCGCTG GTATTGATGG ATGAGATCGG CCGCGGCACG
TCCACCTACG ACGGCCTGGC GCTGGCCGAT GCGGTGGCCC GCCACCTTGC ATACGAGAAC
CGCTGCTACA CGCTGTTTGC CACCCACTAC TTCGAACTGA CCGCGCTGGC CGACGAGCAG
CACGAGGGCG GCCGCAGCGG CATCGCCAAC GTGCATCTGG ACGCCGTCGA GCACGGCGAA
GCACTGGTGT TCATGCATGC AGTGAAGGAT GGCCCGGCCA ACCGCAGCTT CGGCCTGCAG
GTGGCCGCCC TGGCCGGCCT GCCGCGCGCC ACCGTGGCGC AGGCGCGCAG GCGCCTGGCC
GAGCTGGAAC AGCGCGGTGG TGAAAGCCAT GCCGCCGAGT TGGCGCCGCA GGCGTTGGAT
GCACCGCAGC AGTTCGGCCT GTTCGCGGCA CCGTCGAGCA AGGCGCAGGA CGCACTGGCC
GCGATCGACC CCGACGAACT GACCCCGAAG CAGGCGCTGG AAGCGTTGTA CCGGTTGAAG
GCGCTGCTGT AA
 
Protein sequence
MSKEKSAEHT PLMKQFFAAK SEYPDLLLFF RMGDFYELFY DDARKAARLL DITLTQRGSS 
GGAPIPMAGV PVHAYEGYLA RLVALGESVA ICEQIGDPAL AKGLVERKVV RIVTPGTVTD
EALLDERRDT LLMTLSRSKQ GYGLAWADLA GGRFLVNEVD TDDALEAELA RLEPAELLVP
DEENWPEFLR QRSGVRRRAP WLFDADSGRR QLLNFFKLHD LSGFGIDDKP RATAAAGALL
GYVEETQKQR LPHLTSISME TAGEAIAMNA ATRRHLELDT RVDGDTRNTL LGVLDSTVTP
MGGRLLRRWL HRPLRLREVL VQRHHAVETL IDRGSDADIR EQFRRLGDLE RILTRVALRS
ARPRDFSTLR DGLGLLPAVR EVLAPLDSPR LQTLHAALGE HDECAHLLAS AIAEMPPLKL
SDGGVLADGF DAELDELRRL STHADQFLVD LEQRERESSG IATLKVGYNR VHGYYIEISK
GQSERAPVHY TRRQTLTNAE RYITEELKAF EDKVLSARDR SLSREKYLYE QLLDTLGTQL
EPLKQCAAAL SELDVLAAFA ERAQALDWAR PELQAEPCLK IERGRHPVVE AVRDQPFEPN
DLDLHPDRRM LVITGPNMGG KSTYMRQNAL IVLLAHIGSF VPASRALIGP IDRILTRIGA
GDDLARGQST FMVEMAETSY ILHHATAHSL VLMDEIGRGT STYDGLALAD AVARHLAYEN
RCYTLFATHY FELTALADEQ HEGGRSGIAN VHLDAVEHGE ALVFMHAVKD GPANRSFGLQ
VAALAGLPRA TVAQARRRLA ELEQRGGESH AAELAPQALD APQQFGLFAA PSSKAQDALA
AIDPDELTPK QALEALYRLK ALL