| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1127 |
|---|
| Symbol | ispH |
|---|
| ID | 6474978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1282059 |
|---|
| End bp | 1283009 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642730291 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_002027515 |
|---|
| Protein GI | 194364905 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTGC TGCTCGCCAA CCCGCGTGGA TTCTGTGCCG GCGTCGATCG TGCGATCGAG
ATCGTCAAGC GCGCGATCGA AACGCTGGGC GCGCCCATCT ATGTCCGCCA TGAAGTGGTG
CACAACCGCT TCGTGGTCGA TGACCTGAAG CAGCGCGGTG CGATCTTCGT CGAGGAACTG
GATGAAGTGC CGGACAACAA CACGGTCATC TTCAGTGCGC ACGGCGTGTC CCAGGCCGTG
CGCCAGGAAG CCGAGCGACG TGGTCTGAAG GTGTTCGACG CCACCTGCCC GCTGGTGACC
AAGGTGCACT TCGAAGTTGC CCGCCACTGC CGTGCCGGCC GTGACGTAGT GCTGATCGGC
CACGCCGGTC ACCCGGAAGT GGAAGGCACC ATGGGTCAGT GGAACCGCGA AGCCGGTACC
GGCCAGATCT ATCTGGTGGA GGACGTGGAG CAGGTTGCCA CGCTGCAGAT CAAGCAGCCG
GAAAACTTCG CCTACACCAC CCAGACCACG TTGTCGGTGG ATGACACGCG CGGCATCATC
GATGCGCTGC GCGAGCGCTT CCCGGCGATG CAGGGCCCGA AGAACGACGA CATCTGCTAC
GCCACGCAGA ACCGCCAGGA TGCCGTGCGC GACCTGGCCA AGCGCTGCGA TCTGGTGCTG
GTGGTCGGCT CGCCGAACAG TTCCAACTCC AACCGCTTGA GCGAGCTGGC CCGCCGCGAA
GGCGTCGAGT CGTACCTGAT CGATGGTGCG CACGAGATCG ACCCGGCGTG GGTGGTGGGC
AAGCAGCACA TCGGCGTGAC TGCGGGTGCC TCGGCGCCGC AGGTGCTGGT CGATGGCGTG
CTGGCGCGGC TGGCCGAGCT GGGTGCCAAC GGCGTGGGCG AGCTGGACGG CGAGCCGGAA
TCGATGGTGT TCGCGCTGCC GAAGGAACTG CGCCTGCGCC TGGTCGACTG A
|
|---|
| Protein sequence | MDVLLANPRG FCAGVDRAIE IVKRAIETLG APIYVRHEVV HNRFVVDDLK QRGAIFVEEL
DEVPDNNTVI FSAHGVSQAV RQEAERRGLK VFDATCPLVT KVHFEVARHC RAGRDVVLIG
HAGHPEVEGT MGQWNREAGT GQIYLVEDVE QVATLQIKQP ENFAYTTQTT LSVDDTRGII
DALRERFPAM QGPKNDDICY ATQNRQDAVR DLAKRCDLVL VVGSPNSSNS NRLSELARRE
GVESYLIDGA HEIDPAWVVG KQHIGVTAGA SAPQVLVDGV LARLAELGAN GVGELDGEPE
SMVFALPKEL RLRLVD
|
|---|
| |