| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1113 |
|---|
| Symbol | |
|---|
| ID | 6474964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1266608 |
|---|
| End bp | 1267528 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642730277 |
|---|
| Product | acyl-CoA thioesterase II |
|---|
| Protein accession | YP_002027501 |
|---|
| Protein GI | 194364891 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.247123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCCC CCTTGAACGA CACGCCCGAA CCCGTCGTCT CCGAGCTGAT CGACCTGCTC
ACGTTGGAGC GGCTGGAGGA CAACCTGTTC CGCGGGCAGA GCCGCGACAT CGGCACCAAG
TACGTGTTCG GCGGCCAGGT GCTGGGCCAG GCGCTGGCTG CGGCGCAGGC CACGGTCGAC
AACGGCCGCC ACGTGCACTC GCTGCACGCC TACTTCCTGC GCGCCGGCAA CATCGACCAC
CCGATCGTCT ACGACGTCGA CCGCACCCGC GACGGCGGCA GCTTCTCGGT GCGCCGGGTC
ACTGCGATCC AGCACGGCAA GGTGATCTTC TTCTGCGCGG CCTCGTTCCA GCAGGCCGAA
ACCGGTGCCG AGCATCAGCA CAAGATGCCC GAGGTGCCGC AGCCGGAAGA CATCGAGCCG
AACCGGCCGC TGCCGGCTGA AGTGCTGGAA CGGCTGCCGA TCAAGGTGCA GCGCTGGCTG
TCACGCGGCG GCCCGTTCGA GTTCCGCCAC GTCTACCCGC GTGACGAACT CAACCCGCCC
AAGCGCCCGC CCTACCACCA GGTGTGGCTG CGCCTGAGCG AGCCGGTCGG CGATGCCCCG
GAGCTGCACC AGGCACTGCT GGCCTATGCC TCCGACTTCC ACCTGCTGGG CACCGCCACG
TTCCCGCACG GCATCAGCTA CTACCACCCG CACGTGCAGA TGGCCTCGCT GGACCACGCG
ATCTGGTTCC ACCGCCCGTT CCGCGCCGAC GACTGGCTGC TGTACTCGCT GGACAGCCCC
AGCGCGCAGG ATTCGCGCGG CCTGGCCCGC GGCCAGTTCT TCACCCGTAA TGGCGTACTC
GTCGCCAGCA CCGCGCAGGA AGGCCTGATC CGCGTCGTTC CCGACCAGGC AGCAGCGGCC
GCCGTGCCGG CCAAGGATTG A
|
|---|
| Protein sequence | MAAPLNDTPE PVVSELIDLL TLERLEDNLF RGQSRDIGTK YVFGGQVLGQ ALAAAQATVD
NGRHVHSLHA YFLRAGNIDH PIVYDVDRTR DGGSFSVRRV TAIQHGKVIF FCAASFQQAE
TGAEHQHKMP EVPQPEDIEP NRPLPAEVLE RLPIKVQRWL SRGGPFEFRH VYPRDELNPP
KRPPYHQVWL RLSEPVGDAP ELHQALLAYA SDFHLLGTAT FPHGISYYHP HVQMASLDHA
IWFHRPFRAD DWLLYSLDSP SAQDSRGLAR GQFFTRNGVL VASTAQEGLI RVVPDQAAAA
AVPAKD
|
|---|
| |