Gene Smal_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1078 
Symbol 
ID6478505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1228961 
End bp1229671 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID642730242 
Productmalonate decarboxylase, gamma subunit 
Protein accessionYP_002027466 
Protein GI194364856 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CGCTGCACGC GCTGCTTGAT GCCCTGTTTC CGCGTGGCCA CGCCATTGCG 
GTGAACGATT CGGTGCTGAC CGGCAGCGCC ACCACCGAGG ATGGCGAGGT GACCGTGATC
GGTACCGCCG ACAAGCTTGA AGTGGGCGTG GACCACGCAT TGGCACTGGC CGAAACCGTG
CTGGCCAGCA CCGCCGCGCA TCCGCAACGA CCGATCGTGA TGCTGGTCGA CACCGCCGGC
CAACGCCTGG CACGCCGTGA CGAACTGCTT GGCATCAACG GCTACTTCGC TCACTTGGCG
CAGACGCTGG ATCTGGCACG CCGACGCGGT GCGCGGCTGG TGGCCCTGGT CTATGGCGAG
TCGGTCAGCG GCGGCTTCCT CTCATTCGGT CTGATGGCCG ACCACATCCA CGCCCTGCCC
GATGCGCAGG TGCGGGTAAT GGACCTGCGC GCGATGGCAA GGGTGACCAA GCAGCCGCTG
GAGAAACTGC AGGCACTCAG CCAGACCTCG CCAGTGTTCG CGCCGGGCGT GGAGAACTAC
GTGGCAATGG GTGCGGTGGA ATCGCTATGG GATGGCGATC TGGCCACGCA CCTGCTGCAG
GCCCTGCGCA CGCCCGCCGA AGGCGACTGC CGCGCCACGC GGGGTGCCGA ACGTGGTGGG
CGCACACTAT CCGCAAGCGT GGCTGCAGCC GTGAGCCAGG GCGATGCCTG A
 
Protein sequence
MSLPLHALLD ALFPRGHAIA VNDSVLTGSA TTEDGEVTVI GTADKLEVGV DHALALAETV 
LASTAAHPQR PIVMLVDTAG QRLARRDELL GINGYFAHLA QTLDLARRRG ARLVALVYGE
SVSGGFLSFG LMADHIHALP DAQVRVMDLR AMARVTKQPL EKLQALSQTS PVFAPGVENY
VAMGAVESLW DGDLATHLLQ ALRTPAEGDC RATRGAERGG RTLSASVAAA VSQGDA