Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0931 |
Symbol | |
ID | 6478204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1078427 |
End bp | 1079464 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642730095 |
Product | twitching motility protein |
Protein accession | YP_002027319 |
Protein GI | 194364709 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.413956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.826545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCG CCGAGCTGTT GGCGTTTTCC GTAAAGAACA AAGCGTCCGA CCTGCACCTG TCCGCAGGCC TGCCGCCGAT GATCCGCGTG GACGGCGACG TGCGCCGGAT CAACATCCCA GCCCTGGACC ACAAACAGGT CCACGCGCTG GTGTACGACA TCATGTCCGA CAAGCAGCGC CGCGATTACG AGGAATTCCT CGAAGTGGAC TTCTCCTTCG AGATCCCGTC GCTGGCGCGC TTCCGTGTCA ATGCGTTCAA CCAGAACCGC GGCGCCGGTG CGGTGTTCCG TACCATTCCG TCCGAGGTGC TCACCCTCGA GGACCTGGCC TGCCCGCCGC TGTTCCGCGA AGTGATCCAG CAGCCGCAGG GCCTGATCCT GGTCACCGGC CCGACCGGTT CGGGCAAGTC GACCACGCTG GCGGCGATGA TCGACTACAT CAACAAGAAC GAGTACGGCC ACATCCTCAC CGTCGAGGAT CCGATCGAAT TCGTGCACAC CTCGCAGAAG TGCCTGATCA ACCAGCGCGA AGTGCACCGT GATACGCATG GCTTCAACGA AGCGCTGCGC TCGGCACTGC GTGAGGATCC GGACATCATC CTGGTCGGCG AACTGCGTGA CCTGGAAACC ATCCGCCTGG CGCTGACCGC GGCGGAAACC GGCCACCTTG TGTTCGGGAC CCTGCACACC AGTTCGGCCG CCAAGACCAT CGACCGCATC ATTGACGTGT TCCCGGCCGG CGAAAAGCCG ATGGTGCGCT CGATGCTGTC CGAGTCGCTG CGTGCAGTGA TCTCGCAGGC GCTGCTGAAG AAGGTCGGCG GCGGTCGTAC CGCTGCGTGG GAAATCATGG TCGGCACCCC GGCCATCCGC AACCTGATCC GGGAGGACAA GGTCGCGCAG ATGTATTCGG CCATCCAGAC CGGCCAGCAG TACGGCATGA TGACCCTGGA CCAGCACTTG CAGGACCTGG TCAAGCGCAG CCTGATCACC CGCAACCAGG CCCGCGAGTA CGCCAAGGAC AAGCGTCTGT TCGAGTAA
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Protein sequence | MDIAELLAFS VKNKASDLHL SAGLPPMIRV DGDVRRINIP ALDHKQVHAL VYDIMSDKQR RDYEEFLEVD FSFEIPSLAR FRVNAFNQNR GAGAVFRTIP SEVLTLEDLA CPPLFREVIQ QPQGLILVTG PTGSGKSTTL AAMIDYINKN EYGHILTVED PIEFVHTSQK CLINQREVHR DTHGFNEALR SALREDPDII LVGELRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRI IDVFPAGEKP MVRSMLSESL RAVISQALLK KVGGGRTAAW EIMVGTPAIR NLIREDKVAQ MYSAIQTGQQ YGMMTLDQHL QDLVKRSLIT RNQAREYAKD KRLFE
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