Gene Smal_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0840 
Symbol 
ID6478036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp975495 
End bp977450 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content66% 
IMG OID642730001 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_002027228 
Protein GI194364618 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA AACTCCGCGA CAAGACCTCA GGCTGGATCG TCACTGTGAT CCTGGGGCTG 
CTGATGATTC CGTTCCTGTT CGTGATCGAC AACAGCTACC TGGGTGGCGT TGGCGCACAG
AACGTGGCCA AGGTTTCCGC GCCTCCGACC TGGTGGCGTT CGGCCCCGTC GTGGTGGCCG
GTGCGGATGC TGTGGCAGCA CCATGAGATC AGTGCGCAGG ATTTCCGCAC CCGCTTCGAA
CAGGAGCGCA TGCGCGAGCG CCAGCAGCAG GGTGAGAACT TCGACCCGCG TGCGTTCGAA
AGCAATGAAA GCAAGATGGC CGTGCTCGAT CAGCTGATCG ATGAGCAGGT CGTGCGCCTG
GTCGGCGAGC AGGCCGGTGT CGTGATCGGC GATGGCGCGG TGCGTGAGTA CATCACCACC
ATCCCGGCCT TCCTCGATTC GAACGGCAAG TTCAACGAGA ACAACTACCG CCTGGCCCTG
GCCGGCGGCA ATCCGCCGCG TACCCCTACC CAGTTCCAGG AACTGGTGCG TGAGAGCCTG
CAGCAGTCGG TGATTCCTTC CGGCCTGCAG AACTCCGGCT TCGTCACCCA GGCCGAAACC
GAGCGCCTGC TGAAGCTGCT GGGTGAAACC CGCGACGTGG AGCTGGCCGC GCTGCCGGAA
GTGCCGGCCG ATACGGCGCC GGTCACCGAC GCGCAGATCA AGCAGTGGTA CGACAGCCAT
GGCAAGGATT TCCGCCAGGC CGAGAGCGTG TCGCTGGAGT ACGTCGAGAT CAACGGTGGC
AACCTGCCGG CGCCGACCGC GGCCGACGAA GCCACCCTGC GCAAGCGCTA TGAAGACGAA
AAGGCGAAGT TCACCTCGCC GGAACAGCGC CAGGCCTCGC ACATCCTGCT GACCGGTGAC
GGTGCCGAAG CCAAGGCGAA CAAGATCGCT GCCGAGGCCA AGGCTGCCGG CGCCGACTTC
GCCGCGTTGG CCAAGGCCAA CTCGGAAGAT CCGGGTTCGA AGGAGCAGGG CGGTGACCTG
GGCTGGGTCG AGCGTGGCGC AATGGTCAAG CCGTTCGAAG ACGCCCTGTT CGCCGCCAAG
GCGGGTGACG TGATCGGCCC GGTGAAGACC GACTTCGGTT ACCACATCAT CAAGGTCGCC
GCCGTGCGCG GTGGCGAAGG CAAGTCGTTC GAGGAAGTGC GTGACACGCT CGCCGCAGAG
CAGCTGAAGG CCGACGGCGA GCGCGGCTTC AACGAGCTGG CTGGTCGCCT GGTCGACGCC
ATCAACAAGA GCCCGAGCGA TCTGGCCGCT GCGGCCAAGG AAGTGAACCT GCCGCTGCAG
ACTCTGGGCC CGATCACCCG TGCCACCGCC AGCGGTATTG CCACCGATCC GGCCGTGCTG
CGTGCCGCGT TCTCCGACGT GCTGGTGCAG GACGGCACCG CCAGCGACCC GATCGCTCTG
GGGGGCGCCA CCAACCACAG TGTGGTTATC CGCGTGGCTG CACACACCCC GGAACAAGCG
ATGCCACTGG ACAAGGCCCG CGAGCAGGTA ATCGCCGCGA TCCGCGCCGA CCGCCAGCGC
CAGGCCAGCG ACAAGGCGGC CGACGCCGTG CTGGCCAAGC TGAAGGCGGG CGCCACCCTG
CAGTCGCTGG CCGCCAGCGA GAAGCTGCAG CTGAGCCCGA TGCCGGGCCT GCCGCGCAGC
CAGCCGGTGC CGACCCCGGA AATCAATCGC GCGATCTTCA GCGCGCCGGT TCCGGCCGAA
GGCAAGCCGA GCTACGGCAA GGTTGACGTC AACGGCCACG CGCTGCTGTT CGCAGTGAAC
AAGGTCAATC CGGGCGACAT CAAGGAAGTG ACCGCCGAGC AGCAGAAGCA GCTGAAGGAC
CAGCTGAGCC AGATCGACGG CATGGCCGCA GCCAAGGCCT ACATCGAGGC GATGCGCAAG
AAGTTCGTGA TCCAGACCAC CGAAGCGAAC CTGTAA
 
Protein sequence
MLQKLRDKTS GWIVTVILGL LMIPFLFVID NSYLGGVGAQ NVAKVSAPPT WWRSAPSWWP 
VRMLWQHHEI SAQDFRTRFE QERMRERQQQ GENFDPRAFE SNESKMAVLD QLIDEQVVRL
VGEQAGVVIG DGAVREYITT IPAFLDSNGK FNENNYRLAL AGGNPPRTPT QFQELVRESL
QQSVIPSGLQ NSGFVTQAET ERLLKLLGET RDVELAALPE VPADTAPVTD AQIKQWYDSH
GKDFRQAESV SLEYVEINGG NLPAPTAADE ATLRKRYEDE KAKFTSPEQR QASHILLTGD
GAEAKANKIA AEAKAAGADF AALAKANSED PGSKEQGGDL GWVERGAMVK PFEDALFAAK
AGDVIGPVKT DFGYHIIKVA AVRGGEGKSF EEVRDTLAAE QLKADGERGF NELAGRLVDA
INKSPSDLAA AAKEVNLPLQ TLGPITRATA SGIATDPAVL RAAFSDVLVQ DGTASDPIAL
GGATNHSVVI RVAAHTPEQA MPLDKAREQV IAAIRADRQR QASDKAADAV LAKLKAGATL
QSLAASEKLQ LSPMPGLPRS QPVPTPEINR AIFSAPVPAE GKPSYGKVDV NGHALLFAVN
KVNPGDIKEV TAEQQKQLKD QLSQIDGMAA AKAYIEAMRK KFVIQTTEAN L