Gene Smal_0792 details

Gene Information

• Locus tag: Smal_0792
• Symbol: prpE
• ID: 6477895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stenotrophomonas maltophilia R551-3
• Kingdom: Bacteria
• Replicon accession: NC_011071
• Strand: +
• Start bp: 914433
• End bp: 916313
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642729942
• Product: propionyl-CoA synthetase
• Protein accession: YP_002027180
• Protein GI: 194364570
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00519205
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.139333
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACTACG AGGAAACCTA CCGTCGCTCG ATCGACGAGC CGGAGGCCTT CTGGGGCGAG 
GAAGCCAAGC GCATCCATTG GCACAAACCG CCGCAGCAGG TGCTCGACTA CAGCAACCCG 
CCGTTCCGGC GCTGGTTCGT CGGCGGCGAA ACCAATCTCT GCTACAACGC GGTCGACCGC 
CACCTGGCTG AGCGCGCCGA CCAGCTGGCG TTGGTCGCCA TCTCCACCGA AACCAACAGC 
ACCCGCGAGA TCACCTATCG CCAGCTGTAT CGCGAAGTGA ACGACTTCGC CGCCGTGCTC 
AAGCACCTCG GTGTCGGCCA CGGTGACCGC GTGGTGATCT ACATGCCGAA CATGGCCGAA 
GCCGTGTTCG CGATGCTCGC CTGCGCGCGC ATCGGTGCGG TGCACTCGGT GGTGTTCGGC 
GGCTTCGCCG CGCACAACCT GGCGCTGCGC ATCGACGATG CCAAGCCCAA ACTGCTGATC 
GCCGCCGATG CCGGCATGCG CGGCGGCAAG CTGATTCCGT ACAAGGCGAT GGTCGACGCG 
GCCTGCGCAG AGGCCAGTAA TCCGCCGCCA CATGTGTTGA TCGTGTCGCG TGGGTTGGAC 
CCGGCCGAGC CCCGTGTGGC GGGGCGCGAT GTGGAATACG CCACCCTGCG TGCGCAGATC 
GGCGAAACCG ATGTGCCGGT GCAGTGGCTG GAATCAAGCG AGCCGAGCTA CCTGCTGTAC 
ACCTCCGGCA CCACCGGCAA GCCGAAGGGC GTGCAACGCG ATGTCGGCGG CTATGCGGTG 
GCGATGGCGC AGTCGATGGA GACCGTGTTC GACTGCCGGC CAGGGCAGGT GATGTTCTCC 
ACCTCCGATG TCGGCTGGGC GGTCGGCCAT TCCTACAACG TGTACGGCCC GCTGATCGGC 
GGCTGCACCT CGCTGCTCTA CGAAGGGCTG CCGACCAACC CGGACCCGGG CATCTGGTGG 
GCGCTGTGCG AGCAGTACAA CGTGCGCACG ATGTTCTCGT CGCCCACCGC CATCCGCGTG 
CTGAAGAAGC ACGACGCGGA CTTCATCCAT CGCCACGACC TGGGCGCGCT GAAGTACCTG 
TTCCTGGCCG GCGAGCCGCT GGACGAGCCG ACCGCGCACT GGATCAGTGA AGCGCTCGGC 
AAGCCGATCA TCGACAATTA CTGGCAGACC GAAACCGGCT GGCCGGCGCT GACCCTGCTG 
CCGGGCCTGG AGATGAAGCC GGTGCGGTTC GGTTCGCCGG GCTTCCCCAA CCTCGGTTAC 
CGGATGAAGG TGATCGACGA GAACACCGGC GAGGAAGTCG CAGCGGGGCA GAAGGGCGTG 
CTGGTGATGA CCCCTCCATT GCCGCCGGGC TGCATGAGCA CGGTGTGGAA CGACGACAGC 
CGTTTCCTGC AGAGCTACTT CAGCCACTTC AAGGAACTGC TGTACAGCTC GCTGGACTGG 
GCGATCCGCG ACGATGATGG CTACACCTTC ATCCTCGGTC GCACCGATGA TGTGATCAAC 
GTGGCCGGGC ACCGCCTGGG TACGCGCGAG ATTGAAGAAG CCATCTCCAG CCATCCGCGC 
GTGGCCGAGG CTGCCGTGAT CGGGGTCAAG GATGAACTGA AGGGGCAGGT GCCGCTGGTG 
TTCGTCACCC TCAAGCAGGG GCTCGATGGC GAGGATCCGG CGCCGGTGGT GGCCGAGATG 
ATGGCCACGG TGACCGCATC GCTCGGTGCG GTTGCGCGCC CGGCGCACGT GCACGTGGTC 
AACGCGTTGC CCAAGACCCG CTCGGGCAAG CTGCTGCGGC GTTCGCTGCA GGCGCTGGCC 
GAGCAGCGTG ACCCGGGCGA CCTGTCGACG CTGGATGATC CCAGCGCGCT GGAGGAGATC 
CGCCGCGCGC TGGGCCGCTG A 

 

Protein sequence

MNYEETYRRS IDEPEAFWGE EAKRIHWHKP PQQVLDYSNP PFRRWFVGGE TNLCYNAVDR 
HLAERADQLA LVAISTETNS TREITYRQLY REVNDFAAVL KHLGVGHGDR VVIYMPNMAE 
AVFAMLACAR IGAVHSVVFG GFAAHNLALR IDDAKPKLLI AADAGMRGGK LIPYKAMVDA 
ACAEASNPPP HVLIVSRGLD PAEPRVAGRD VEYATLRAQI GETDVPVQWL ESSEPSYLLY 
TSGTTGKPKG VQRDVGGYAV AMAQSMETVF DCRPGQVMFS TSDVGWAVGH SYNVYGPLIG 
GCTSLLYEGL PTNPDPGIWW ALCEQYNVRT MFSSPTAIRV LKKHDADFIH RHDLGALKYL 
FLAGEPLDEP TAHWISEALG KPIIDNYWQT ETGWPALTLL PGLEMKPVRF GSPGFPNLGY 
RMKVIDENTG EEVAAGQKGV LVMTPPLPPG CMSTVWNDDS RFLQSYFSHF KELLYSSLDW 
AIRDDDGYTF ILGRTDDVIN VAGHRLGTRE IEEAISSHPR VAEAAVIGVK DELKGQVPLV 
FVTLKQGLDG EDPAPVVAEM MATVTASLGA VARPAHVHVV NALPKTRSGK LLRRSLQALA 
EQRDPGDLST LDDPSALEEI RRALGR