Gene Smal_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0791 
Symbol 
ID6477894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp913138 
End bp913752 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID642729941 
Productpseudouridine synthase 
Protein accessionYP_002027179 
Protein GI194364569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00896147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0723816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACC TGCATTACAT CGACGACGCG CTGCTGGTGG CCGAGAAGCC GGCCGGCCTG 
CTGTCCGTGC CCGGCCGCAG CGCCGAGAAC CAGGACTGCG TGGTCGCGCG CCTGCAGGCG
CGGTACCCGG ATGCGTTGAC CGTGCACCGC CTGGACCAGG TGACCTCGGG TCTGCTGCTG
CATGCGCGTG GCAAGGACAT GCAGGCAGCG TTGTCGATGC AGTTCGAGCA GCGCCAGGTT
GGCAAGCGTT ATGAAGCGAT CGTGGAGGGG CTGCTTGAAG GCGATGCCGG CGAAGTGGAT
CTGCCGTTGA TCGTGGACTG GCCGAACCGG CCGAAGCAGA TGGTCGACCA CGAACGCGGC
AAGCCGGCGC TGACGCGCTG GCGCGTAATG GCGCGTGATG TTGAAGCGCA GCGCACGCGC
GTGGCGTTGG AACCGATCAC TGGCCGCAGC CATCAGCTGC GCCTGCACAT GGCCAGTCTC
GGCCATCCCA TCGTTGGTGA CGTGCTGTAT GGCGCAGCAC CGGCGCAGCG CGTGCACCTG
CATGCGCGCA GCCTGCAGTT CACCCACCCG GTGACGGGCG AGGCGCTCGC GTTCGAGTCC
GCGACTCCGT TTTAG
 
Protein sequence
MIHLHYIDDA LLVAEKPAGL LSVPGRSAEN QDCVVARLQA RYPDALTVHR LDQVTSGLLL 
HARGKDMQAA LSMQFEQRQV GKRYEAIVEG LLEGDAGEVD LPLIVDWPNR PKQMVDHERG
KPALTRWRVM ARDVEAQRTR VALEPITGRS HQLRLHMASL GHPIVGDVLY GAAPAQRVHL
HARSLQFTHP VTGEALAFES ATPF