Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0791 |
Symbol | |
ID | 6477894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 913138 |
End bp | 913752 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729941 |
Product | pseudouridine synthase |
Protein accession | YP_002027179 |
Protein GI | 194364569 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00896147 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0723816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCACC TGCATTACAT CGACGACGCG CTGCTGGTGG CCGAGAAGCC GGCCGGCCTG CTGTCCGTGC CCGGCCGCAG CGCCGAGAAC CAGGACTGCG TGGTCGCGCG CCTGCAGGCG CGGTACCCGG ATGCGTTGAC CGTGCACCGC CTGGACCAGG TGACCTCGGG TCTGCTGCTG CATGCGCGTG GCAAGGACAT GCAGGCAGCG TTGTCGATGC AGTTCGAGCA GCGCCAGGTT GGCAAGCGTT ATGAAGCGAT CGTGGAGGGG CTGCTTGAAG GCGATGCCGG CGAAGTGGAT CTGCCGTTGA TCGTGGACTG GCCGAACCGG CCGAAGCAGA TGGTCGACCA CGAACGCGGC AAGCCGGCGC TGACGCGCTG GCGCGTAATG GCGCGTGATG TTGAAGCGCA GCGCACGCGC GTGGCGTTGG AACCGATCAC TGGCCGCAGC CATCAGCTGC GCCTGCACAT GGCCAGTCTC GGCCATCCCA TCGTTGGTGA CGTGCTGTAT GGCGCAGCAC CGGCGCAGCG CGTGCACCTG CATGCGCGCA GCCTGCAGTT CACCCACCCG GTGACGGGCG AGGCGCTCGC GTTCGAGTCC GCGACTCCGT TTTAG
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Protein sequence | MIHLHYIDDA LLVAEKPAGL LSVPGRSAEN QDCVVARLQA RYPDALTVHR LDQVTSGLLL HARGKDMQAA LSMQFEQRQV GKRYEAIVEG LLEGDAGEVD LPLIVDWPNR PKQMVDHERG KPALTRWRVM ARDVEAQRTR VALEPITGRS HQLRLHMASL GHPIVGDVLY GAAPAQRVHL HARSLQFTHP VTGEALAFES ATPF
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