| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0788 |
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| Symbol | |
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| ID | 6477891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 909332 |
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| End bp | 911179 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642729938 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_002027176 |
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| Protein GI | 194364566 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0236333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCG AAAATCTTCG CAACATCGCC ATCGTCGCCC ACGTCGACCA TGGCAAGACC
ACCCTGGTCG ACCAGCTGCT GAAGCAGTCC GGCACCCTGT CCGAGCGTAC CGTCCTCGCC
GAGCGCGTGA TGGACAGCAA CGACCAGGAA AAGGAACGCG GCATCACCAT CCTGGCCAAG
AACACGGCCA TCACCTGGGA AGACAAGAAG ACCGGTATCA AGAACCGGAT CAACATCGTC
GACACCCCCG GACACGCCGA CTTCGGTGGT GAGGTCGAGC GCGTGCTGTC GATGGTCGAC
ACCGTGCTGA TCCTCGTCGA CGCGATGGAC GGCCCCATGC CGCAGACCCG CTTCGTCACC
CAGAAGGCCT TCGCGATGGG CTTCAAGCCG ATCGTCGTGG TCAACAAGGT CGACCGCCCG
GGCTCGCGTC CGGAGTGGGT GATCGACCAG GTGTTCGACC TGTTCGACAA GCTCGGCGCC
ACCAATGAGC AGCTCGACTT CCCGATCGTC TACGCCTCGG CCCTGAACGG CTACGCTGGC
CTGGAAGACA CCGTGCGCGA CGGCGACATG ACCCCGCTGT ACGAAGCGAT CATGCAGCAC
GCGCCGAAGC CGGAAGTCGA TCCGGAAGGC CCGTTCCAGA TGCGCATCAG CCAGCTGGAC
TACAACAACT TCGTGGGCGT GATCGGCATC GGCCGCATCC AGCGCGGCAC CCTGAAGAAG
AACATGCAGG TCGCGGTCAT CGACCGTGAA GGCAAGAAGC GCAACGGCAA GGTGCTGCAG
GTGCTGGGCT TCCTGGGCCT GGAGCGCATC GAGCAGGATT CGGCCGAGGC CGGTGACATC
GTCGCCATCT CGGGCATCCA GGAGCTGACC ATCTCCGACA CCCTGTGCGC CCCGGACACC
CCGGAAGCGC TGCCGGCACT GACCGTCGAC GAGCCGACCA TCTCGATGAC CTTCCAGGTC
AACAACTCGC CGTTCGCCGG CAACAAGGAC CTGTCCGGTG GCAAGTTCCT GACCAGCCGC
CAGATCAAGG ACCGCCTGGA CCGTGAAAAG GTCCACAACG TCGCGTTGAA GGTTGAACAG
CTGGAAGACG CCGACAAGTT CCTGGTCTCC GGCCGTGGCG AGCTGCACCT GTCGGTGCTG
ATCGAGAACA TGCGTCGTGA AGGCTACGAG CTGGCCGTGT CGCGCCCGGA AGTGATCATC
AAGCAGATCG ACGGCCAGGC CATGGAGCCG ATCGAGCAGC TGGTGGTGGA CATCGAAGAA
ATCCACCAGG GCGGCGTGAT GGAAAAGCTG GGCACCCGCA AGGGCCAGCT GAAGAACATG
GAATCGGACG GCAAGGGCCG CGTGCGCCTT GAGTACCAGA TCCCGGCCCG TGGCCTGATC
GGTTTCCAGA ACGAGTTCAA GACCCTCACC CAGGGTTCGG GCCTGCTGTT CCATGTCTTC
GACCACTACG GTCCGAAGGA GCAGGGCGCG ATCGCCAAGC GCATCAACGG CGTGATGATC
GCCAATGCAC CGGGCGCCAC GCCGGCCTAC TCGCTGGGCC CGCTGCAGGA GCGCGGCAAG
CTGTTCGCTG CTGAAGGCGA CAACGTGTAT GAAGGTCAGC TGGTCGGTAT CCACTCCAAG
GACAACGACC TGACCGTCAA CGCGATCAAG ACCAAGCCGC TGACCAACAT GCGCGCTTCG
GGCAAGGACG ATGCGATCCA GCTGACCCCG GCGATCAAGT ACTCGCTGGA GCAGGCCCTG
GACTTCATCG AAGACGACGA GCTGGTCGAG ATCACCCCGA AGGAGATCCG CCTGCGCAAG
AAGTTCCTGA CCGAAAGCGA CCGCAAGAAG GCTTCGCGCG GCGGCTGA
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| Protein sequence | MSIENLRNIA IVAHVDHGKT TLVDQLLKQS GTLSERTVLA ERVMDSNDQE KERGITILAK
NTAITWEDKK TGIKNRINIV DTPGHADFGG EVERVLSMVD TVLILVDAMD GPMPQTRFVT
QKAFAMGFKP IVVVNKVDRP GSRPEWVIDQ VFDLFDKLGA TNEQLDFPIV YASALNGYAG
LEDTVRDGDM TPLYEAIMQH APKPEVDPEG PFQMRISQLD YNNFVGVIGI GRIQRGTLKK
NMQVAVIDRE GKKRNGKVLQ VLGFLGLERI EQDSAEAGDI VAISGIQELT ISDTLCAPDT
PEALPALTVD EPTISMTFQV NNSPFAGNKD LSGGKFLTSR QIKDRLDREK VHNVALKVEQ
LEDADKFLVS GRGELHLSVL IENMRREGYE LAVSRPEVII KQIDGQAMEP IEQLVVDIEE
IHQGGVMEKL GTRKGQLKNM ESDGKGRVRL EYQIPARGLI GFQNEFKTLT QGSGLLFHVF
DHYGPKEQGA IAKRINGVMI ANAPGATPAY SLGPLQERGK LFAAEGDNVY EGQLVGIHSK
DNDLTVNAIK TKPLTNMRAS GKDDAIQLTP AIKYSLEQAL DFIEDDELVE ITPKEIRLRK
KFLTESDRKK ASRGG
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