| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0780 |
|---|
| Symbol | |
|---|
| ID | 6477883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 898984 |
|---|
| End bp | 899982 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642729930 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_002027168 |
|---|
| Protein GI | 194364558 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0642076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTA CCGCCAACCA GGTTCTGCGT CCTCGCGGTC CGCAGATCGA ACGCCTTACC
GACACCCGTG CAAAGGTCGT TATCGAACCT TTGGAGCGGG GTTACGGGCA TACGCTGGGT
AATGCCCTGC GTCGCGTGCT GCTGTCGTCC ATCCCGGGCT TCGCCATCAC GGAAGTCGAA
ATCGACGGCG TGTTGCATGA GTACACCACG GTCGAAGGTC TGCAGGAGGA CGTGCTGGAA
GTCCTGCTGA ACCTGAAGGA CGTGGCCATC CGTATGCACT CCGGCGACAG CGCCACCCTG
TCCCTGTCCA AGCAGGGCCC GGGCGTTGTC ACCGCTGCCG ATATCAAGGT CGACCACAAT
GTGGAGATCC TGAACGGCGA CCATGTCATC TGCCACCTGA CCAAGGACAC GGCAGTCAAC
ATGCGTCTGA AGATCGAACG TGGTTTCGGC TACCAGCCGG CTGCCGCGCG TCGTCGTCCG
GACGAAGAAA CCCGTGCCAT CGGCCGTCTG GTCCTGGATG CCTCGTTCTC GCCGGTCCGC
CGCGTCGCCT ATGCCGTGGA AGCGGCCCGC GTCGAGCAGC GTACCGACCT GGACAAGCTG
GTCATCGATA TCGAGACCAA CGGCACCATC GATGCCGAGG AAGCCGTGCG CACCGCCGCC
GACATCCTCA GCGACCAGCT GTCGGTGTTC GGTGACTTCA CCCACCGCGA CCGCGGTGCG
GCCAAGCCGG CCAACAACGG CGTGGATCCG GTGCTGCTGC GCCCGATCGA CGATCTGGAG
CTGACCGTGC GTTCGGCGAA CTGCCTGAAG GCCGAAAGCA TCTACTACAT CGGCGATCTG
ATCCAGAAGA CCGAAGTGGA GCTGCTGAAG ACCCCGAACC TGGGCAAGAA GTCGCTCACC
GAGATCAAGG AAGTGCTGGC CCAGCGTGGC CTGTCACTCG GCATGAAGCT GGAGAACTGG
CCGCCGGCCG GCGTCGCCAG CCACGGCATG CTGGGCTGA
|
|---|
| Protein sequence | MTVTANQVLR PRGPQIERLT DTRAKVVIEP LERGYGHTLG NALRRVLLSS IPGFAITEVE
IDGVLHEYTT VEGLQEDVLE VLLNLKDVAI RMHSGDSATL SLSKQGPGVV TAADIKVDHN
VEILNGDHVI CHLTKDTAVN MRLKIERGFG YQPAAARRRP DEETRAIGRL VLDASFSPVR
RVAYAVEAAR VEQRTDLDKL VIDIETNGTI DAEEAVRTAA DILSDQLSVF GDFTHRDRGA
AKPANNGVDP VLLRPIDDLE LTVRSANCLK AESIYYIGDL IQKTEVELLK TPNLGKKSLT
EIKEVLAQRG LSLGMKLENW PPAGVASHGM LG
|
|---|
| |