| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0749 |
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| Symbol | rpoB |
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| ID | 6477852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 872779 |
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| End bp | 876933 |
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| Gene Length | 4155 bp |
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| Protein Length | 1384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642729899 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002027137 |
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| Protein GI | 194364527 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.910245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.541943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCT ATTCGTTCAC CGAAAAAAAG CGTATCCGCA AGGATTTCGG CAAGCAGCGT
TCGATTCTCG AAGTGCCGTT CCTGCTCGCC ATCCAGGTGG ATTCCTACCG TGAATTCCTG
CAGGAAAACG TCGATCCGGC CAAGCGCACG GACCACGGCC TGCACGCTGC GCTGAAGTCG
GTCTTCCCGA TCGCCAGCTA CAGCGGCAAC GCTGCCCTGG AATACGTCGG CTACAAGCTG
GGCGAACCGG TCTTCGACGA GCGTGAGTGC CGCCAGCGTG GCATGAGCTA CGGCGCCCCT
CTGCGCGTGA CCGTGCGCCT GGTGATCTAC GACCGTGAGT CGTCGACCAA GGCCATCAAG
TACGTGAAGG AGCAGGAGGT CTATCTGGGC GAAATCCCGC TGATGACCGA GAACGGCACC
TTCATCGTCA ACGGCACCGA GCGCGTCATC GTCTCGCAGC TGCACCGTTC GCCGGGCGTG
TTCTTCGACC ACGACCGTGG CAAGACCCAC AGCTCGGGCA AGCTTCTGTA CAGCGCCCGC
ATCATTCCTT ACCGCGGTTC CTGGCTGGAC TTCGAGTTCG ACCCGAAGGA CGCGCTGTTC
ACCCGTATCG ACCGTCGCCG CAAGCTGCCG GTGTCGATCC TGCTGCGCGC GCTTGGCTAC
AGCAACGAAG AGATGCTGGC CGAGTTCTTC GAGATCAACA CCTTCCACAT CAACCCGGAT
GAAGGCGTCC AGCTGGAGCT GGTGCCGGAG CGCCTGCGCG GCGAAACCCT GGGCTTTGAC
CTCGCCGACG GCGACAAGGT CATCGTGGAA GCCGGCAAGC GCATCACCGC GCGCCACATC
AAGCAGCTGG AAGCCTCGGG CATCGCCGCC CTGGCCGTGC CGGACGACTA CATCGTCGGC
CGCATCCTGT CGCACGACGT GGTCGATGCT TCGACCGGCG AACTGCTGGC CCAGGCCAAC
GACGAGATCA CCGACGAGCA GCTGCAGGCC TTCCGCAAGG CCGGCGTGGA TGCCGTGGGC
ACCCTGTGGG TGAACGACCT GGATCGTGGC CCGTACCTGT CCAACACCCT GCGCATCGAC
CCGACCAAGA CCCAGCTGGA AGCCCTGGTC GAGATCTACC GCATGATGCG TCCGGGCGAA
CCGCCGACCA AGGACGCCGC GCAGAACCTG TTCCACAACC TGTTCTTCAC CTTCGAGCGC
TACGACCTGT CCGCGGTCGG CCGCATGAAG TTCAACCGTC GCGTGGGCCG CAAGGAAACC
ACCGGCGAAG CCGTGCTGTA CGACCGCAAG TACTACGGCG AGCGCAACGA CGAAGAGTCC
AAGCGCCTGG TTGCCGCCCA TGGCGACAGC TCCGACATCC TGGACGTGAT CAAGGTCCTG
ACCGAGATCC GCAACGGTCG TGGCGTGGTC GATGACATCG ATCACCTGGG CAACCGTCGC
GTGCGTTCGG TCGGCGAAAT GGCCGAGAAC GTGTTCCGCG TGGGCCTGGT CCGCGTCGAG
CGCGCGGTCA AGGAGCGCCT GTCGATGGCC GAGTCCGAAG GCCTGACCCC GCAGGAGCTG
ATCAACGCCA AGCCGGTCGC CGCTGCCATC AAGGAGTTCT TCGGCTCCTC GCAGCTGTCG
CAGTTCATGG ACCAGAACAA CCCGCTGTCG GAAGTGACCC ACAAGCGTCG CGTCTCGGCC
CTGGGCCCGG GCGGTCTGAC CCGTGAGCGC GCCGGCTTCG AAGTGCGCGA CGTGCACCCG
ACCCATTACG GCCGCGTCTG CACCATCGAA ACCCCGGAAG GCCCGAACAT CGGCCTGATC
AACTCGCTGG CCGTGTACGC CCGCACCAAC CAGTACGGTT TCCTCGAGAC CCCGTACCGC
AAGGTCGTGG ACGGCAAGGT CTATGACGAA GTCGAGTTCC TGTCGGCGAT CGAAGAAAAC
GAGTACGTCA TTGCGCAGGC CAACGCGCTG ACCAATGCCG ACAGCGTGCT GACCGAACAG
TTCGTTCCTT GCCGCTTCCA GGGCGAATCG CTGCTGAAGC CGCCGGCGGA AGTCCACTTC
ATGGACGTCT CGCCGATGCA GACCGTGTCG ATCGCGGCCG CGCTGGTTCC GTTCCTGGAG
CACGATGACG CCAACCGCGC ACTGATGGGC GCCAACATGC AGCGTCAGGC CGTGCCGACC
CTGCGTGCGC AGAAGCCGCT GGTCGGTACC GGCATCGAGC GTGCCGTGGC GCGTGACTCC
GGTGTGACCG TGAATGCCCG TCGTGGTGGC GAGATCGTGC AGATCGATGC CGCCCGCATC
GTGGTCAAGG TGGTCGAGGA AGAAATCGTC GGTGCCACCG ACGCCGGCGT CGACATCTAC
AACCTGGTCA AGTACACCCG TTCGAACCAG AACACCTGCA TCAACCAGCG TCCGCTGGTC
CAGGTGGGTG ACATCATCGC CCGCGGCGAC GTGCTGGCCG ACGGTCCGTC CACCGACATC
GGCGAACTGG CCCTGGGCCA GAACATGCTG ATCGCGTTCA TGCCGTGGAA CGGCTACAAC
TTCGAAGACT CCATCCTGCT TTCCGAGCGC GTGGTGGAAG AGGATCGCTA CACCACGATC
CACATCGAAG AGCTGACCTG CGTCGCGCGT GATACCAAGC TGGGGCCGGA GGAAATCTCC
GCCGACATCC CGAACGTTTC CGAGCAGGCG CTGAACCGCC TGGACGAAAG CGGCGTGGTG
TACATCGGTG CCGAAGTCCG CGCCGGCGAC ATCATGGTCG GCAAGGTCAC CCCGAAGGGC
GAAAGCCAGC TGACCCCGGA AGAGAAGCTG CTGCGCGCGA TCTTCGGCGA GAAGGCGTCG
GACGTGAAGG ACAGCTCGCT GCGCGTGCCG CCGGGCATGG ACGGCACCGT CATCGATGTG
CAGGTCTTCA CCCGCGACGG CATCGAGAAG GACAAGCGCG CCCGTCAGAT CGAAGAGTCT
GAAATCAAGC GCGTCAAAAA GGACTTCGAC GACCAGTTCC GCATCCTGGA AGCGGCCATC
TACATGCGTC TGCGCTCGCA GATCGTGGGC AAGGTGGTCA ACGGTGGCGC TGGCCTGAAG
AAGGGCGACG TCATCAGCGA CGCGTTCCTG GACGGCCTGA AGAAGGCTGA CTGGTTCGCC
CTGCGCATGA AGGACGAGGA CGCTTCGGAA GCCATCGAGC GCGCGCAGAA GCAGATCCAG
GCGCACGAGA AGGAATTCGA GCGTCGCTTC GCCGACAAGC GCGGCAAGAT CACCGCCGGC
GATGACCTCG CCCCGGGCGT GCTGAAGATG GTCAAGGTGT TCCTGGCCGT GAAGCGCCGC
ATCCAGCCGG GCGACAAGAT GGCAGGCCGC CACGGCAACA AGGGTGTGGT GTCCAACGTG
GTGCCGGTCG AGGACATGCC GTACATGGCC TCGGGCGAGA CCGTGGACAT CGTGCTGAAC
CCGCTGGGCG TGCCGTCGCG TATGAACATC GGCCAGATCC TGGAAGTGCA TCTGGGCTGG
GCGGCCAAGG GCCTGGGCCG CAAGATCCAG GCGATGATGG AAGCCCAGGC GGCGGTTGCC
GACCTGCGCA AGTTCCTGGA CGACATCTAC AACCACGATG ACACCAACGT GGCCAACCGT
GTCGACCTGT CGCAGTTCAG CGACGAGGAG CTGCTGCGTC TGGCGCGTAA CCTCACCGAC
GGCGTGCCGA TGGCCACCCC GGTGTTCGAC GGCGCCACCG AAGCGGAAAT CAAGCGCATG
CTGGAACTGG CCGACCTGCC GAGCAGTGGC CAGACCCAGC TGTACGACGG CCGCACCGGT
GAAGCGTTCG ATCGCCACAC CACCGTCGGT TACATGCACT ACCTGAAGCT GAACCACCTG
GTCGACGACA AGATGCACGC CCGTTCGACC GGTCCGTACT CGCTCGTCAC CCAGCAGCCG
CTGGGCGGCA AGGCGCAGTT CGGCGGCCAG CGCTTCGGTG AAATGGAAGT CTGGGCGCTG
GAAGCCTACG GCGCGGCCTA CACCCTGCAG GAAATGCTGA CGGTGAAGTC CGATGACGTG
CAGGGCCGCA ACCAGATGTA CAAGAACATC GTCGACGGTG AGCACGAGAT GGTCGCGGGC
ATGCCGGAAT CCTTCAACGT GCTCGTGAAG GAAATCCGCT CGCTGGCCAT CAACATGGAA
CTGGAAGACA ACTGA
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| Protein sequence | MTSYSFTEKK RIRKDFGKQR SILEVPFLLA IQVDSYREFL QENVDPAKRT DHGLHAALKS
VFPIASYSGN AALEYVGYKL GEPVFDEREC RQRGMSYGAP LRVTVRLVIY DRESSTKAIK
YVKEQEVYLG EIPLMTENGT FIVNGTERVI VSQLHRSPGV FFDHDRGKTH SSGKLLYSAR
IIPYRGSWLD FEFDPKDALF TRIDRRRKLP VSILLRALGY SNEEMLAEFF EINTFHINPD
EGVQLELVPE RLRGETLGFD LADGDKVIVE AGKRITARHI KQLEASGIAA LAVPDDYIVG
RILSHDVVDA STGELLAQAN DEITDEQLQA FRKAGVDAVG TLWVNDLDRG PYLSNTLRID
PTKTQLEALV EIYRMMRPGE PPTKDAAQNL FHNLFFTFER YDLSAVGRMK FNRRVGRKET
TGEAVLYDRK YYGERNDEES KRLVAAHGDS SDILDVIKVL TEIRNGRGVV DDIDHLGNRR
VRSVGEMAEN VFRVGLVRVE RAVKERLSMA ESEGLTPQEL INAKPVAAAI KEFFGSSQLS
QFMDQNNPLS EVTHKRRVSA LGPGGLTRER AGFEVRDVHP THYGRVCTIE TPEGPNIGLI
NSLAVYARTN QYGFLETPYR KVVDGKVYDE VEFLSAIEEN EYVIAQANAL TNADSVLTEQ
FVPCRFQGES LLKPPAEVHF MDVSPMQTVS IAAALVPFLE HDDANRALMG ANMQRQAVPT
LRAQKPLVGT GIERAVARDS GVTVNARRGG EIVQIDAARI VVKVVEEEIV GATDAGVDIY
NLVKYTRSNQ NTCINQRPLV QVGDIIARGD VLADGPSTDI GELALGQNML IAFMPWNGYN
FEDSILLSER VVEEDRYTTI HIEELTCVAR DTKLGPEEIS ADIPNVSEQA LNRLDESGVV
YIGAEVRAGD IMVGKVTPKG ESQLTPEEKL LRAIFGEKAS DVKDSSLRVP PGMDGTVIDV
QVFTRDGIEK DKRARQIEES EIKRVKKDFD DQFRILEAAI YMRLRSQIVG KVVNGGAGLK
KGDVISDAFL DGLKKADWFA LRMKDEDASE AIERAQKQIQ AHEKEFERRF ADKRGKITAG
DDLAPGVLKM VKVFLAVKRR IQPGDKMAGR HGNKGVVSNV VPVEDMPYMA SGETVDIVLN
PLGVPSRMNI GQILEVHLGW AAKGLGRKIQ AMMEAQAAVA DLRKFLDDIY NHDDTNVANR
VDLSQFSDEE LLRLARNLTD GVPMATPVFD GATEAEIKRM LELADLPSSG QTQLYDGRTG
EAFDRHTTVG YMHYLKLNHL VDDKMHARST GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL
EAYGAAYTLQ EMLTVKSDDV QGRNQMYKNI VDGEHEMVAG MPESFNVLVK EIRSLAINME
LEDN
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