Gene Smal_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0652 
Symbol 
ID6477680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp772379 
End bp773092 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID642729797 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002027040 
Protein GI194364430 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.174117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAGA CGAAGGAGAC CTCCGGCTTG GTGCTGGTGG TCGAAGACAA CCGCAACATC 
TCCGAGATGA TCGGGGAATA CCTGGAAGGT CGCGGCTTCG AAGTCGACTA TGCACAGGAC
GGCCTGGATG GCTACCGCCT TGCGGCGGAG AACAGCTATG ACGTCGTGGT GCTCGACTTG
ATGTTGCCGC GCCTGGATGG CATCGAAGTG TGCCGTCGCC TGCGCAACGA TGCGCGCAAG
TCCACCCCGG TGCTGATGCT CACGGCACGC GACACGCTGG ATGACAAGCT CACCGGGCTC
GGTTTCGGCG CCGATGACTA TCTGACCAAG CCGTTCGCGA TCCAGGAGCT GGAAGCACGC
CTGCGCGCGC TGATCCGTCG CGAACGCCGT CAGGTCGGTT CGGAAGTGCT CAAGGTCGCC
GACCTGGTGC TCGATCCGGT CAGCATGCGT GCCACCCGTG CCGGCACCGA GCTGCAGCTG
TCGCCGATCG GCCTGCGCCT GCTGACCATC CTGATGCGCG AATCGCCGCG CGTGGTCACC
CGCCAGGAGA TCGAGCGCGA GATCTGGGGC AACGGGCTGC CGGATTCGGA CACCCTGCGC
AGCCATCTGT ACAACCTGCG CAAGATCATC GACAAGCCGT TCGACCGCCC GCTGCTGCAC
ACCGTACAGA GCGCCGGTTA CCGCATTGCC GATATCGCCC AGCCGATGGC CTGA
 
Protein sequence
MRQTKETSGL VLVVEDNRNI SEMIGEYLEG RGFEVDYAQD GLDGYRLAAE NSYDVVVLDL 
MLPRLDGIEV CRRLRNDARK STPVLMLTAR DTLDDKLTGL GFGADDYLTK PFAIQELEAR
LRALIRRERR QVGSEVLKVA DLVLDPVSMR ATRAGTELQL SPIGLRLLTI LMRESPRVVT
RQEIEREIWG NGLPDSDTLR SHLYNLRKII DKPFDRPLLH TVQSAGYRIA DIAQPMA