Gene Smal_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0603 
SymbolmurC 
ID6477549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp713998 
End bp715434 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID642729748 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_002026991 
Protein GI194364381 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC GCCTGCACGA CACCAACGAC CTGGTGCGCG CGTTCCCGCG CGTGCATTTC 
GTCGGCATCG GCGGCACCGG CATGAGCGGT ATCGCTGAAG TGATGCTGAC GCTGGGCTAT
GAAGTGTCCG GCTCGGACAA CGCCGACAAC GTGGCGACCC GCCGCCTGGC CAGCCTGGGT
GCGCGCATCA TGCGCGGCCA TTCCGCTGCC AACGTGCTGG GCACCGACTG CGTGGTGGTC
TCCAGTGCCA TCCGCGAAGA CAACCCGGAA CTGATGGAAG CGCGCAGCCA GCGCATTCCG
ATCATGCCGC GTGCGGCGAT GCTGGCCGAG CTGATGCGCT TCCGCCGCGG CATCGCGGTG
GCCGGTACCC ATGGCAAGAC CACCACCACC AGCCTCACCG CTGCGGTGCT GAGCGAAGGT
GGGCTGGACC CGACCTTCGT GATCGGTGGC CAGCTGCTGG CCGCCGGTGC CAACGCCAAG
CTGGGTGGTG GCCAGTGGCT GGTGGCCGAG GCCGACGAAA GCGATGGCAG CTTCCTGCGC
CTGAATCCGC TGATGTCGAT CATCACCAAC ATTGATGCGG ATCATCTGGA AAACTACGGC
AACGACTTCG CCCGCGTGCA GGCGGCGTTC GCCGAGTTCC TGCAGCGCCT GCCGTTCTAC
GGCCTGGCGG TGCTGTGCAT CGATGATCCG GAAGTGGCGG CACTGGCCGC CAAGACCCCG
CGCCACGTGA TGAGCTACGG CATGAGCCCG CAGGCCGACG TACGCGCCGA GAACGTGGTG
CAGGAAGGTT CGCGCATGCG CTTCACCCTG CGCCTGCCGC AGGGCACCAG CCAGGAAGTG
GTGCTGGCGC TGCCGGGCAA GCACAACGTA CTCAACGCGC TGGCCGCCGC TGCGGTGGGC
TGGCAGCTGG GCGTGGCGCC GGACGCGATC GCGCGTGCGC TGGAAGGTTT CGCCGGTGTT
GGCCGTCGCT TCAACGATCT GGGCGAAGTG ACCACCGCCA GCGGTGCCAA GGTCCGCATC
ATCGACGACT ACGGTCATCA CCCGAGCGAG CTGGAGGCGG TGTTCGCCGC CGCCCGTGGT
GGCTGGGCTG ACAAGCGTCT GGTGGTGGCC TTCCAGCCGC ACCGCTACAG CCGTACCCGC
GACCAGTTCG ACAAGTTCGC CGCGGTGCTG TCCAGCGTCG ATGCACTGGT GCTGAGCGAG
GTCTACCCGG CCGGCGAGGA ACCGATTGCC GGTGCCGATT CGCATGCGCT GGCCCGCGCC
ATCCGCGCGC GCGGCCGCAG CGAACCGGTG GTGGTGGGCA AGGCCGCCGA GCTGGCCAGC
GTGCTGCCGG ACGTGCTGCA GGACGGTGAC CTGCTGCTGA TGATGGGCGC CGGCGACATC
GGTGCCGTAG CCACCCATAT CGCGGTGGAA GGCTTCAAGG GGGAGGGCGA GGCGTGA
 
Protein sequence
MIRRLHDTND LVRAFPRVHF VGIGGTGMSG IAEVMLTLGY EVSGSDNADN VATRRLASLG 
ARIMRGHSAA NVLGTDCVVV SSAIREDNPE LMEARSQRIP IMPRAAMLAE LMRFRRGIAV
AGTHGKTTTT SLTAAVLSEG GLDPTFVIGG QLLAAGANAK LGGGQWLVAE ADESDGSFLR
LNPLMSIITN IDADHLENYG NDFARVQAAF AEFLQRLPFY GLAVLCIDDP EVAALAAKTP
RHVMSYGMSP QADVRAENVV QEGSRMRFTL RLPQGTSQEV VLALPGKHNV LNALAAAAVG
WQLGVAPDAI ARALEGFAGV GRRFNDLGEV TTASGAKVRI IDDYGHHPSE LEAVFAAARG
GWADKRLVVA FQPHRYSRTR DQFDKFAAVL SSVDALVLSE VYPAGEEPIA GADSHALARA
IRARGRSEPV VVGKAAELAS VLPDVLQDGD LLLMMGAGDI GAVATHIAVE GFKGEGEA