| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0584 |
|---|
| Symbol | nusB |
|---|
| ID | 6477529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 694156 |
|---|
| End bp | 694635 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642729729 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_002026972 |
|---|
| Protein GI | 194364362 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.708112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA ACACCCAGGG CAAGCCCTCC GGTAAGCCCG TCCGCCGCGA TGGCGTCGAC
CCGGTGCTGC GCTCGCGCGC GCGCCGTCGT GCCGTACAGG CCATCTACGC CTGGCAGATC
TCCGGCGGCA ACGCACAGTC GCTGATCGCC CAGTTCGCCC ACGAGCAGGC GCGCGAAATC
GCCGATCTGG CGTACTTCGA AGCGCTGATG CATGGCGTGC TCGACAACCG CCGCGACATC
GACGAGGCCC TCGGCCCGTA CCTGGACCGT GGCATTGAAG AAGTGGATGC GATCGAACGC
GCCGTGCTGC GCCTGGCCGG TTATGAGCTG CGCTACCGCC TGGACGTGCC GTACCGCGTA
GTGATCAACG AAGCCATCGA ATCGGCCAAG CGTTTTGGTT CCGAACACGG CCATACCTAC
GTCAACGGCG TGCTGGATCG TGCCGCCGTG GAATTGCGCA AGGTCGAATC GGGTCACTGA
|
|---|
| Protein sequence | MNKNTQGKPS GKPVRRDGVD PVLRSRARRR AVQAIYAWQI SGGNAQSLIA QFAHEQAREI
ADLAYFEALM HGVLDNRRDI DEALGPYLDR GIEEVDAIER AVLRLAGYEL RYRLDVPYRV
VINEAIESAK RFGSEHGHTY VNGVLDRAAV ELRKVESGH
|
|---|
| |