Gene Smal_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0559 
Symbol 
ID6477463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp664093 
End bp665274 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID642729704 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_002026947 
Protein GI194364337 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01514] nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.618565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0393004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCA TCCAGTCCCT GCTCGACACC GACCTGTACA AGTTCACCAT GATGCAGGCG 
GTGCTCCACC AGCACCCCGG CGCCCAGGTG CAGTACCGGT TCAAGTGCCG CACGCCCGGC
ATCGACCTGG CCCATTACAT CGACCAGATC GACGAAGAGA TCGACCACCT GTGCAGCCTG
CGTTTCAGCG ACGCGGAGCT GGACTACATG CGTGGCCTGC GCTTCGTGAA GCCGGACTTC
GCCGATTTCC TCGGCCTGTT CCACCTCGAC CGCAAGTACA TCCAGCTGCG CGCATCGAAG
ACCGTGCCCG GCGAGATCGA ACTGGACATC ACCGGGCCCT GGCTGCACAC CATCCTGTTC
GAAGTGCCGC TGCTGGCGAT CATCAACGAA GTCTGGTTCC GCAACACCAC CACCGCCGAC
TTCGCCGAGG GCGAGCGCCG CCTGCAGGCC AAGGCCGCGC TGCTGCGTGA TACCCCGGGG
TTCGAGCAGT GCCGCATCGC CGACTACGGC AGCCGCCGCC GCTACTCGCG TGACTGGCAT
GCCCGTCTGC TGCCGCTGCT GCGCGATGCG CTCGGCCCGC AGCTGGTCGG CACCAGCAAC
GTACACTTCG CGCGCCTGTA TGGCATGACT CCGCACGGCA CCATGGCTCA TGAGTACCTG
CAGGCGTTCC AGGCGCTCGG CCCGCGCCTG CGTGATTCGC AGGTGGCGGC ACTGGAATCG
TGGGCACGCG AATATCGCGG CGACCTCGGC ATCGCGCTGT CCGACGTGGT CGGCCTGGAC
GCGTTCCTGC GCGACTTCGA TATGTACTTC TGCAAGCTGT TCGACGGCGT GCGCCACGAC
TCGGGCGATC CGTTCGACTG GGGTGACCGC ATGCTGGCGC ATTTTCAGCA GCGCCGGGTC
GATCCACGCA GCAAGGTGCT GGTGTTCAGC GATGGCCTCG ACATCGTCAA GGTGATGCGC
CTGTATGACT ACTTCCGTGG TCGCTGCCAG GTCGCCTTCG GCGTCGGCAC CCATCTGACC
AATGATCTGG GTCCGACGCC GCTCAACATC GTCATCAAGA TGGTCCGCTG CAACGGCCAG
CCGGTCGCCA AGCTCAGCGA CTCGCCGGGC AAGAGCATGT GCGACGACCC TGGTTACCTG
ACATACCTGC GCCAGGTCTT CGAGTTGCCG CAGCCGGAGT AA
 
Protein sequence
MPIIQSLLDT DLYKFTMMQA VLHQHPGAQV QYRFKCRTPG IDLAHYIDQI DEEIDHLCSL 
RFSDAELDYM RGLRFVKPDF ADFLGLFHLD RKYIQLRASK TVPGEIELDI TGPWLHTILF
EVPLLAIINE VWFRNTTTAD FAEGERRLQA KAALLRDTPG FEQCRIADYG SRRRYSRDWH
ARLLPLLRDA LGPQLVGTSN VHFARLYGMT PHGTMAHEYL QAFQALGPRL RDSQVAALES
WAREYRGDLG IALSDVVGLD AFLRDFDMYF CKLFDGVRHD SGDPFDWGDR MLAHFQQRRV
DPRSKVLVFS DGLDIVKVMR LYDYFRGRCQ VAFGVGTHLT NDLGPTPLNI VIKMVRCNGQ
PVAKLSDSPG KSMCDDPGYL TYLRQVFELP QPE