Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0546 |
Symbol | |
ID | 6477450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 650930 |
End bp | 652651 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729691 |
Product | general secretory pathway protein E |
Protein accession | YP_002026934 |
Protein GI | 194364324 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0871321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCGC TTGCTGCAAC CGCCGCCGAC ACCGCCGAAG GTCGCATCCT GGATGCGCTG CTGGCGCGTG GCCGGCTCAA GGAAGGCGAT CTGGCACGGG CGCGGCCGCT GCATGCCGAA GCCGGTGGCA GCCTGCTCGG CCTGCTGGTG CGGCTGGGGC TGGTCTCCGA GCGTGACCAG GCGCAGGCCA GCGCCGAGGT GCTGGGGCTG CCGCTGCTGG AGGGCAAGCA GCTGCCCGAG GCACCGCCGC AGGGGCTGGC CGAGGGCCTG CCGCTGTCGG TGCGCTTCCT CAAGCAGTTC CATGTGTGCC CGTTGGCGCT GGATGAACAG GGCGTGCGGC TGTGGCTGGC CGATGCCCAC GATCCCTATC CGCAGCAGGC CGTGCAGCTG GCATTGGGCG TACCAGTGAC GCCGGTGCTG GGCATGCGCG CGGAGATCGA TGATCTGGTC GAGCGCTGGT TCGGCCAGGG CCGCAGTGCG ATGGGCGCGA TTGTCGAGAC CGCCGACGGT GAGGGTGGGG CGGTGGACGA CATCGAACAC CTGCGCGACC TCGCCTCGGA AGCGCCGGTG ATCCGCCTGG TCAACCTGGT GATCCAGCGC GCGGTAGAGC TGCGTGCCTC GGACATCCAT GTCGAACCCT TCGAAAGCCG GTTGAAGGTG CGTTACCGCA TCGACGGCGT GCTGGTGGAA GGCGAGAGCC CGCCGGCCAA CCTCACCGCT GCGGTGATCA GCCGCATCAA GATCATGGCC CGGCTCAACA TCGCCGAGCG CCGCCTGCCG CAGGACGGCC GCATCATGCT GCGCGTGCAG GGCAAGGAAC TGGACCTGCG CGTGAGCACG GTGCCGACCG CACACGGCGA AAGCGTGGTG ATGCGCCTGC TCGACCGCGA AACCGTGGTC TTCGATTTCC ACCGGCTCGG CTTCACCGAT GTCTTCCTGC CGCAGTTCCG CAAAGTGCTG GAACAGCCGC ACGGCATCCT GCTGGTGACC GGCCCCACCG GTTCGGGCAA GACCACCACG CTGTACACCG CGCTGAGCCA GCTCAATACC GCCGACGTCA AGATCATCAC GGTCGAAGAC CCGGTCGAGT ACCAGATCGA GGGCATCAAC CAGATCCAGG CCAAGCCGCA GATCGGGCTG GACTTCGCCA ATGCCCTGCG CAGCATCGTG CGCCAGGACC CGGACATCAT CATGATCGGC GAAATGCGTG ACCTGGAAAC CGCGCGCATC GCGATCCAGT CGGCGCTGAC CGGCCATCTG GTGCTGTCCA CCCTGCATAC CAACAACGCA GCCGGCGGCA TCACCCGCCT GCTCGACATG GGGGTGGAGG ACTATCTGCT CACCTCCACC ATCAACGGCA TCCTTGCCCA GCGCCTGGTG CGCCGGCTGG AACCGACCCA CGCCGAGCGC TATGAAGCCT CGCCGGAAGA AGTCGAACGC TTCGAACTGC GCCGGCTGCA GCCGCAGGGG CCGATCCACC TGTACCGCCC GAAACCCTCG GCGCTGGCAC CGACCGGCTA CCTGGGACGC ACCACCATCA TGGAATTCCT GGTGATGAAC GACGCGCTGC GGCGTGCGGT GATGCGCCGT GATGGCATGG GCGAGATCGA GCGCATCGCC CGCGAAGCCG GCATGCGCAC CATGTACGAG GATGGCCTGT CCAAGGCGCT GAGCGGGCAG ACGACCATCG AGGAAGTGCT GCGCGTGACC GAGGAAAGCT GA
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Protein sequence | MNALAATAAD TAEGRILDAL LARGRLKEGD LARARPLHAE AGGSLLGLLV RLGLVSERDQ AQASAEVLGL PLLEGKQLPE APPQGLAEGL PLSVRFLKQF HVCPLALDEQ GVRLWLADAH DPYPQQAVQL ALGVPVTPVL GMRAEIDDLV ERWFGQGRSA MGAIVETADG EGGAVDDIEH LRDLASEAPV IRLVNLVIQR AVELRASDIH VEPFESRLKV RYRIDGVLVE GESPPANLTA AVISRIKIMA RLNIAERRLP QDGRIMLRVQ GKELDLRVST VPTAHGESVV MRLLDRETVV FDFHRLGFTD VFLPQFRKVL EQPHGILLVT GPTGSGKTTT LYTALSQLNT ADVKIITVED PVEYQIEGIN QIQAKPQIGL DFANALRSIV RQDPDIIMIG EMRDLETARI AIQSALTGHL VLSTLHTNNA AGGITRLLDM GVEDYLLTST INGILAQRLV RRLEPTHAER YEASPEEVER FELRRLQPQG PIHLYRPKPS ALAPTGYLGR TTIMEFLVMN DALRRAVMRR DGMGEIERIA REAGMRTMYE DGLSKALSGQ TTIEEVLRVT EES
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