Gene Smal_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0545 
Symbol 
ID6477449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp648940 
End bp650793 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content68% 
IMG OID642729690 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_002026933 
Protein GI194364323 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0878069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAAGA AGCAGAACCT TCGCATCAAT GTGCTTGCCG CCGCCGTGCT GTCGATGACG 
GCTGTCGGTG CCGTCCACGC CGCCGGCCTG CCGACCCGTG AGCCGGTGCG CCAGGCCAGC
ACCGCCCAAC CGGGCGCCGA GCGCATCATC GTCAAGTACC GGGCCGGCGC TGCTGCCGCC
ACCGACCGCT CGGCGAAGCT GTCCAGCGTG CAGTCGGCGC TGACCCGGGC CAGCCTGTCC
GGCGGTACCT CACGTGCCAG TACCCTCGGC CCGCAGGTGG TACGCAAGCT CGCTACCGGT
GCGGACCTGA TCCGCGTGCA GGGCCGCCTG GCCCCGGCCG AACTGCAGCG TGTGCTGAAG
GAACTGCAGG CCGACCCGTC GGTGCAGTAC GCCGAAGCCG ACGTGAAGCT GCGCCGCACC
GAGCTGCGTG CCGGCGATGT GCAGCCGGCA CTGGTGCCGA ACGATCCCTT CTACCAGCAG
AACCAGTGGC ACCTGCACAA TGCGGTCGGC GGCATCAACG CACCGGCGGC ATGGGATGTC
TCGCAGGGCG AAGGCATCGT GGTGGCGGTG ATCGATACCG GCATCCTGCC GCAGCATCCG
GACCTGGTTG GCAACCTGTT GGAGGGTTAC GACTTCATCA GCGACGCCGA GACCTCGCGG
CGCCCGACCA ATGATCGTGT GCCAGGCGCG CTTGACCAGG GCGACTGGGT GGAGAACGAC
AACGAGTGCT ACGACGGCTC GCTGGCCGAG GACAGCTCCT GGCACGGCAC CCATGTGGCC
GGTACCGTCG CCGAGCAGAC CAACAATGGC GTCGGCATGG CCGGTGTCGC CTACAAGGCC
AAGGTGCTGC CGGTGCGCGT GCTGGGCAAG TGCGGCGGCT ACCTGTCCGA CATCGCCGAC
GCGGTGGTCT GGGCATCGGG TGGCACGGTG ACCGGCATCC CGGCCAACAC CAACCCGGCC
GAGATCATCA ACATGAGCCT GGGCGGCAGC GGCGCCTGCG GCAGCACCTA CCAGGACGCC
ATCAACGGCG CCATCTCGCG CGGTACCACG GTGGTGGTGG CGGCCGGCAA TGAGACCGAC
AACGCGTCCA AGTACCGTCC GGCCAGCTGC GAAGGCGTGG TGACCGTGGG TGCGACCCGT
ATCACCGGCG GCATCACCTA CTACTCCAAC TACGGCACCC GCGTGGATCT GTCCGGCCCG
GGCGGCGGTG GCAGCGTCGA CGGCAATCCC GGTGGCTACA TCTGGCAGAC CGGCTCCAAT
GCGGCGACCA CGCCGGATTC GGGTACGCCT GGCTACATGG GCATGGGCGG CACCTCGATG
GCCTCGCCGC ATGTGGCCGC CGTTGCTGCA CTGGTGCAGA GCGCGCTGAT CGCCAAGGGC
AAGGATCCGC TGACCCCGGC GGCCATGCGC ACCCTGCTGA AGGAAACCGC GCGTCCGTTC
CCGGTCGCCA TCCCGGCGGC CACCCCGATC GGTACCGGCA TCCTCGACGC CAAGGCCGCG
CTGGCCAAGG CACTGGAAGA GCCGTGCACC GAGAACTGCG GACCGGTGGC CACGCCGCTG
ACCAACAAGG CGGCCATCGG CGGTCTGTCC GGTGCGGCTG GCAGCAGCAA GCTTTACAGC
TTCGAAGCGG CCGCCGGCAA GCAGTTCAGC GTGATCACCT ACGGCGGCAC CGGCAATGTT
TCGGTCTACG TGGCTGAAGG CCGTGAGCCC AGTGCCAGCG ACAACGACGC CAAGTCGACC
CGTCCGGGCA CCTCCGAGAC AGTGCGGGTG ACCAAGCCGG TGGCGGCCAC CTACTACATC
AAGGTGGTGG GTGAAGCGGC CTACAACGGG GTGAGCATTC TCGCCACGCA GTAA
 
Protein sequence
MIKKQNLRIN VLAAAVLSMT AVGAVHAAGL PTREPVRQAS TAQPGAERII VKYRAGAAAA 
TDRSAKLSSV QSALTRASLS GGTSRASTLG PQVVRKLATG ADLIRVQGRL APAELQRVLK
ELQADPSVQY AEADVKLRRT ELRAGDVQPA LVPNDPFYQQ NQWHLHNAVG GINAPAAWDV
SQGEGIVVAV IDTGILPQHP DLVGNLLEGY DFISDAETSR RPTNDRVPGA LDQGDWVEND
NECYDGSLAE DSSWHGTHVA GTVAEQTNNG VGMAGVAYKA KVLPVRVLGK CGGYLSDIAD
AVVWASGGTV TGIPANTNPA EIINMSLGGS GACGSTYQDA INGAISRGTT VVVAAGNETD
NASKYRPASC EGVVTVGATR ITGGITYYSN YGTRVDLSGP GGGGSVDGNP GGYIWQTGSN
AATTPDSGTP GYMGMGGTSM ASPHVAAVAA LVQSALIAKG KDPLTPAAMR TLLKETARPF
PVAIPAATPI GTGILDAKAA LAKALEEPCT ENCGPVATPL TNKAAIGGLS GAAGSSKLYS
FEAAAGKQFS VITYGGTGNV SVYVAEGREP SASDNDAKST RPGTSETVRV TKPVAATYYI
KVVGEAAYNG VSILATQ