Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0498 |
Symbol | |
ID | 6477402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 586681 |
End bp | 587412 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642729643 |
Product | short chain dehydrogenase |
Protein accession | YP_002026886 |
Protein GI | 194364276 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.795397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAAGA TCCTGATCAT CGGCGCGACA TCGGCCATCG CCGAGGCGGT AGCACGCCAA TACGCCGGAC GTGCCGCGGC GCTCTATCTG GTCGGCCGTA GCGCCGGGAA GCTTGATGCC ATTGCCGCCG ACCTACGCGT GCGCGGCGCG CAGCGTGTGG AGACCGGGGT TCTGGACGTG AACCATGTGG CCGCACACGG TGGACTGCTG GACAACGCAT GGGCAGCGTT TGGGGGCATC GATACCGTTC TAATCGCCCA CGGCACTCTG CCGGACCAGG CCGCCTGCGA TGCCTCTGTA GACCTGTCAC TACACGAGTT CGCCACAAAT GCCACCGCGA CGATCGCTCT TGCCGCTGCA CTTGCACAGC GTCTACAGCA TGGCGCTACT CTGGCCGTGA TCTCCTCGGT AGCGGGCGAT CGCGGTCGCG CCAGCAACTA CCTGTACGGC AGTGCAAAAG CCGCCGTTAC CACCTATCTA AGCGGGCTTG GCCAGCGCCT GCACGCGAGC GGCGTCAATG TATTGGCCAT CAAGCCTGGA TTCGTCGATA CACCAATGAC AGCCGCGTTC AAGAAGGGAG CACTCTGGGC GACACCGGAA CAGGTGGCCA ACGGGATTCT CAAGGCAATT GGAAAGCGCA AATCCGTGGC TTACCTGCCT GGCTTCTGGT GGGCGGTAAT GATGATCATC AAGAATATCC CAGAATTCAT TTTCCGCAGG ATCAAGCTTT GA
|
Protein sequence | MQKILIIGAT SAIAEAVARQ YAGRAAALYL VGRSAGKLDA IAADLRVRGA QRVETGVLDV NHVAAHGGLL DNAWAAFGGI DTVLIAHGTL PDQAACDASV DLSLHEFATN ATATIALAAA LAQRLQHGAT LAVISSVAGD RGRASNYLYG SAKAAVTTYL SGLGQRLHAS GVNVLAIKPG FVDTPMTAAF KKGALWATPE QVANGILKAI GKRKSVAYLP GFWWAVMMII KNIPEFIFRR IKL
|
| |