Gene Smal_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0488 
Symbol 
ID6478440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp572346 
End bp573716 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content64% 
IMG OID642729633 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_002026876 
Protein GI194364266 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01137] cystathionine beta-synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCC ACTCTTCCGT CCTCGAACTC ATCGGCCAGA CCCCGATCGT CAAGGCCCAG 
CGCCTGGACA CCGGTGCCTG CGAGCTCTAC CTGAAGCTGG AGAGCGCCAA CCCGGGCGGG
TCGATCAAGG ATCGCATCGG CCTGTCGATG ATCGAGGCAG CGGAAAAACG CGGCGACCTG
AAGCCGGGCG CGACCCTGGT CGAGGGCACC GCCGGCAATA CCGGCCTGGG CCTGGCCCTG
GTAGCGCAGC AGAAGGGCTA CAAGCTGATC CTGGTCGTTC CCGACAAGAT GAGCCGCGAA
AAGATCTTCA ATCTGAAGGC GATGGGTGCC GAAGTGCGTT TGACCCGCTC GGACGTGGCC
AAGGGCCATC CCGAGTACTA CCAGGACCTG GCCAAGACCA TCGCCGAGCA GACCCCGGGC
GCCTACTTCA TCAACCAGTT CGGCAACCCG GACAACCCGG CCGCGCATGA ATTCGGTACT
GGCCCGGAAA TCCTCGAGCA GATGGGCGGC GACCTCGATG CCATCGTGTT CGGCTGCGGC
AGTTCCGGCA CCATGACCGG CCTGTCGCGC GCCTTCGCCA AGCTGTCGCC GAAGACCGAG
CTGGTGCTGG CCGATCCGGT TGGTTCGATC CTGGCCGAGT ACATCAACGA CGGCAATCTG
AACGACAAGT CGGGCAGCTG GCTGGTGGAA GGCATCGGCG AGGACTTCCT GCCGTCGATC
TCCGATTTCA GCCGCGTCAA GAAGGCTTAT GCCATCAGCG ACGCCGAGAG CTTCCACACC
GCACGCGAGC TGCTGGGCAA GGAAGGCATC CTCGGCGGTT CGTCGACCGG CACCCTGCTG
GCGGCGGCGC TGAAGTACTG CAAGGAGCAG ACCACGCCGA AGAAGGTGCT GGTGCTGGTG
CCGGACACCG GCAACAAGTA CCTGTCAAAG ATGTACAACG ACTACTGGAT GCTGGACAAC
GGCTTCCTGC AGCGCCCGCA GCACGGCGAC CTGCGCGACC TGATCCTGCG TCCGTACGGC
CAGCGCGACA CCGTGGTGAT CGGCCCGAAC GACCTGCTGA CCACGGCCTA CCAGCGCATG
AAGCTGTATG ACGTGTCGCA GCTGCCGGTG CTGGACGGCG ATCAGCTGGT CGGTATCGTC
GATGAAAGCG ACGTGCTGCT GCATGTCTAT GGCGATGAAG CCCGTTTCCG CGACCCGGTG
GCGACCGCAA TGGTCAGCAA GCTGGACCGG CTGGACGTGA AGTCGCCGAT CGAAGCGCTG
TTGCCGGTGT TCGACCGCGG CCAGGTGGCG ATCGTGATGG ACGGCAATGC CTTCCTGGGC
CTGATCACCC GTATCGACCT TCTGAACTAC CTGCGTCGGC GCGTTCAATA A
 
Protein sequence
MPIHSSVLEL IGQTPIVKAQ RLDTGACELY LKLESANPGG SIKDRIGLSM IEAAEKRGDL 
KPGATLVEGT AGNTGLGLAL VAQQKGYKLI LVVPDKMSRE KIFNLKAMGA EVRLTRSDVA
KGHPEYYQDL AKTIAEQTPG AYFINQFGNP DNPAAHEFGT GPEILEQMGG DLDAIVFGCG
SSGTMTGLSR AFAKLSPKTE LVLADPVGSI LAEYINDGNL NDKSGSWLVE GIGEDFLPSI
SDFSRVKKAY AISDAESFHT ARELLGKEGI LGGSSTGTLL AAALKYCKEQ TTPKKVLVLV
PDTGNKYLSK MYNDYWMLDN GFLQRPQHGD LRDLILRPYG QRDTVVIGPN DLLTTAYQRM
KLYDVSQLPV LDGDQLVGIV DESDVLLHVY GDEARFRDPV ATAMVSKLDR LDVKSPIEAL
LPVFDRGQVA IVMDGNAFLG LITRIDLLNY LRRRVQ