Gene Smal_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0476 
Symbol 
ID6478428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp557227 
End bp557589 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID642729621 
Productqueuosine biosynthesis protein QueD 
Protein accessionYP_002026864 
Protein GI194364254 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT TCAAAGTCTT CATGCTCGAG GCGGCGCACC GCCTCCCCAA CGTGCCGCCG 
GGGCACAAGT GCGCGCGCCT GCACGGCCAC TCCTTCCGGG TGGAACTGAA GGTCGAGGGC
GAGCCCGGCG CGCAGACCGG CTGGATCATG GATTTCGGCG ACGTGAAGGC GGCCTTCCAG
CCGATCTACG ACCGCCTGGA CCATCACTAC CTCAATGACA TCCCCGGCCT GGAGAACCCG
ACCAGCGAGA ACCTGGCGGT GTGGATCTGG AACGAGCTCA AGCCCAGCCT GCCTGCACTG
AGCGAGATCA CCGTGCACGA AACCTGCACC TCCGGCTGTC GCTATCGCGG CCCGGCCATC
TGA
 
Protein sequence
MEIFKVFMLE AAHRLPNVPP GHKCARLHGH SFRVELKVEG EPGAQTGWIM DFGDVKAAFQ 
PIYDRLDHHY LNDIPGLENP TSENLAVWIW NELKPSLPAL SEITVHETCT SGCRYRGPAI