| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0461 |
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| Symbol | |
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| ID | 6478413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 540306 |
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| End bp | 542147 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642729606 |
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| Product | TonB-dependent vitamin B12 receptor |
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| Protein accession | YP_002026849 |
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| Protein GI | 194364239 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00224002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC AGTCCCGAAT GCTGTCCCTG GCCGTGCTCG CCGCCCTTCC CGCGCTGGCC
CAGGCCGCCG ATGACACCAC CGCGCTTGAC CAGATCCTGG TCACCGCCAC CCGCACCCCG
ATCGCCCTGC AGTACAGCAT CGCGCCGGCG CAGGTAATCG ACCGCGCGCA GATCGAATCC
AGCCAGGCCA CCTCGCTGCA GGAGCTGCTG CGCGGCCGCG CAGGCATCAA CCTGACCAAT
GCTGGCGGCC TCGGCAAGCA GAGCTCGCTG TTCCTGCGCG GCACCAACTC CGGCCACACC
GTGGTGCTGG TGGATGGCGT GCGCATCAAC AGCGCCGATC TCGGCCTGGC CATGTACCAG
GACCTGCCGC TGGCGCAGAT CGAGCGCGTC GAAATCGTAC GCGGCCCGCA GTCGAGCCTG
TACGGTGCCG ATGCCATCGG CGGCGTGATC CAGATCTTCA CCCGCCGCAA CCAGGGCGAC
TTCGCCCCGC ACTTCCAGCT CGGTGGCGGC AGCAATGGCC TGCGCGAAGC CAGCGGCGGC
ATCGGCGGTG GTACCGAGCG CGGCTGGTTC GGCGCCGACA TCGCCTACCA GCACTCCGAC
GGCATCGATG CCTGCCGCGG CTCGGCCACG CTGTTCGCCG GCTGCTTCGC AGACGAACCC
GACCGCGACG GCTACCGCAA CCTGTCCAAG AGCCTGCGTG GCGGCTACAG CTTCAACGAC
CAGTGGAACG TGGAAGGCAG CGCGCTGCGC GCCGACGGCA AGAACCACTA CGACGGTTAC
TACAACTACT CGGAAACCCG CCAGCAGGTC CTGGCCGGCA AGGTGCGCTA CACCCCGTCC
GAACGCCTGG CATTCACTGC CAACGTCGGC CGCAGCGACA ATGAATCCGA CAACTTCGGT
GCACCAGGGG TGTTTGGCAG CGCGCAGACC CATCGTGACA GCGCCTCGCT GCAGGGTGAC
ATCACGCTGG CCGAAGGTCA GCTGCTGAGC ACCGGCGTGG ACTGGAGTGA GGACAACCTG
GATGGCAGCA GCGCCGGATA TCTGGTCGAC AGCCGCCGCA ACACCGGCGT GTTCGTGCAG
TACCAGGGCC GCTTCGGCCG CCATCAGCTG CAGGTCAGCG CGCGCAACGA CGACAACCAG
CAGTTCGGCA ACCATGCCAC CGGCAGCGTG GGCTGGGCGA TGGAACTGGA GCACGGCCTG
CGCGTCAATG CCAGCTACGG CACGGCGTTC AAGGCACCGA CCTTCAGTGA CCTGTATGAC
CCGTGGAGCG GCGTGCCAAC GTTGAACCCG GAAAAGTCCA AGAGCGCAAA CCTCGGCGTT
TCGCAGCACG GCAAAGGTTG GCACTGGGGC CTGGACGTAT ACGAGACCCG CATTGATGAC
CTGATCACCT ACGATGCGTC CACAATGAAA ATGCAGCAGG TGGAGAAGGC ACGCATCCGT
GGCGCCGAGC TGACCGGTGG CGTGCTGCTG GCCGGTTTCG ACATCAATGC GCAGCTAAGC
TACACCGACC CACGCAACCG CACCCACGGC AGCACCCAGT TCGACAACTG GCTGCCGCGC
CGCGCGCAGC AGACCGCGCG CCTGGACATT GACCGCCGCT TCGGTGATTT CCGCGCCGGC
CTGACCGTGC AGGGTGCGGG CAAGCGCTAT GACGATGCCG CCAACGCAGT GAAGGTCGGC
GGCTACGGCA CGCTGGACCT GCGCGCCGAG TACGCGCTGA CGCCGGAGTG GTCGCTGCTG
GCGCGTGCCG CCAACGTGTT CGACCGCCGC TACGAGACGG TGGCGTGGTT CAACCAGCCT
GGTCGCGAGT ACCAGCTGAG CGTGCGTTAC CAGCCGAAGT GA
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| Protein sequence | MKLQSRMLSL AVLAALPALA QAADDTTALD QILVTATRTP IALQYSIAPA QVIDRAQIES
SQATSLQELL RGRAGINLTN AGGLGKQSSL FLRGTNSGHT VVLVDGVRIN SADLGLAMYQ
DLPLAQIERV EIVRGPQSSL YGADAIGGVI QIFTRRNQGD FAPHFQLGGG SNGLREASGG
IGGGTERGWF GADIAYQHSD GIDACRGSAT LFAGCFADEP DRDGYRNLSK SLRGGYSFND
QWNVEGSALR ADGKNHYDGY YNYSETRQQV LAGKVRYTPS ERLAFTANVG RSDNESDNFG
APGVFGSAQT HRDSASLQGD ITLAEGQLLS TGVDWSEDNL DGSSAGYLVD SRRNTGVFVQ
YQGRFGRHQL QVSARNDDNQ QFGNHATGSV GWAMELEHGL RVNASYGTAF KAPTFSDLYD
PWSGVPTLNP EKSKSANLGV SQHGKGWHWG LDVYETRIDD LITYDASTMK MQQVEKARIR
GAELTGGVLL AGFDINAQLS YTDPRNRTHG STQFDNWLPR RAQQTARLDI DRRFGDFRAG
LTVQGAGKRY DDAANAVKVG GYGTLDLRAE YALTPEWSLL ARAANVFDRR YETVAWFNQP
GREYQLSVRY QPK
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