Gene Smal_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0458 
Symbol 
ID6478410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp537726 
End bp538655 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content70% 
IMG OID642729603 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002026846 
Protein GI194364236 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.512377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.930115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAT TGACCGCCAT GACCGTGTTC GTCGAGGTCG CCGAGCGCGG CAGCCTCACC 
GCCGCCGCCG AGGTGCTGGA CATGTCGCGG GCGATGGTCA GCCGCTACCT GGCCGAGGTC
GAGGGCTGGC TGGGGGCGCG CCTGCTGCAC CGGACCACGC GCCGGGTCAG CCTGACCGGG
CCGGGCGAGG CAGCGCTGGC GCGCTTCCGG CAGATGCTGG CGATCGGCGA GGAACTGCGG
GGCGAACTGG CCAGCGATGA CCCCGAGCCG CATGGCACGC TGCGGGTAAC CGCCAGTGTC
TCGTTCGGGC AAAGCCACCT GGCGCGGGCG GTGGCCGGCT TCGTCGCACG CCACCCGGCA
GCGCGCATCG AACTGCTGCT GGTCGACCGC ACGGTGAACC TGGTGGAAGA GCGCGTGGAT
CTGGCGGTGC GCATCGCCCG CCAGATCGAC CCGAGCCTGA TCGCGCGGCG GCTGGCCACC
TGCCGTTCGG TGCTGTGCGC GACGCCGTCC TACCTGCAGG CGCGTGGCAC ACCGACCGCG
CCCGAGCATC TGGCCGCGCA CAACTGCCTG ACCCATCACT ACGTCGGCAA GAGCCTGTGG
CAGCTGCACC GTGAAGGCCG TTCGCTGTCG GTGGCGGTGG GCGGCAACAT CAGCGCCAAC
GAAGCGTCAC TGCTGCTGGA GGCAGTACGC GCCGGTGCCG GCATCGCCAT GCTGCCGACC
TACCAGGTGG CGCCGTTCCT GCGCAGTGGC GAACTGATCG AACTGCTGCC CGAATTCAGT
CTGGACGAAC TGGGCATTCA TGCGGTGTAC GCGTCACGGC GCCAGCAGCC CGCTATCATG
CGGCGATTCC TGGACTTCCT GGCCGAGTGC TTCGCCAGCC CGGCCTTCCA GGATCTGGAT
TGGCGCCCAC CGGGCAAGGA GAACACATGA
 
Protein sequence
MDRLTAMTVF VEVAERGSLT AAAEVLDMSR AMVSRYLAEV EGWLGARLLH RTTRRVSLTG 
PGEAALARFR QMLAIGEELR GELASDDPEP HGTLRVTASV SFGQSHLARA VAGFVARHPA
ARIELLLVDR TVNLVEERVD LAVRIARQID PSLIARRLAT CRSVLCATPS YLQARGTPTA
PEHLAAHNCL THHYVGKSLW QLHREGRSLS VAVGGNISAN EASLLLEAVR AGAGIAMLPT
YQVAPFLRSG ELIELLPEFS LDELGIHAVY ASRRQQPAIM RRFLDFLAEC FASPAFQDLD
WRPPGKENT