Gene Smal_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0288 
Symbol 
ID6478073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp336912 
End bp339587 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content69% 
IMG OID642729422 
Productosmosensitive K+ channel signal transduction histidine kinase 
Protein accessionYP_002026676 
Protein GI194364066 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.399581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGG CACCCATGAC TGATGCGCGT ACCCGCCAGG CCGATGCCCT GGTCGAAGGC 
CTGCAACGCG AAGCCGGCGG CAAGCTGACC GTGTTCCTCG GTGCGGCGCC GGGCGTGGGC
AAGACCTACA CGATGCTGAC CCGCGCGCAG GAACAGCTGC GCCGCGGTGT CGACCTGGTT
GTGGGCCTGG TGGAAACCCA TGGCCGTGCC GATACCCAGG CACTGCTGGA AGGCCTGCCG
CAGTTGCCGC TGAAGGAAGT GGCCTACCAC GGCCACTCGC TGCAGGAGAT GGATCTGGAT
GCCGTGCTCG CCCGGCATCC GGCGCTGGTG CTGGTGGACG AACTGGCCCA CCGCAATGCG
CCGGGCAGCC GCCACGAGCG GCGCTGGCAG GATGTGATGG AGCTGCTGGA CGCCGGCATC
GACGTCTGGA CCACGGTCAA CATCCAGCAT CTGGAAAGCC TCAACGATGT GGTGATGCGG
ATCACCGGCG TGCGCGTCAG CGAGACCGTG CCGGACGGCG TGCTCGACCG CCTGCACGAC
ATCGTGCTGG TCGACCTGCC GCCGCGCGAA CTGATCGCGC GCCTGCAGCA GGGCAAGGTC
TATGTGCCCG AACAGGCTGC GCAGGCGCTG CAGGCATTCT TCTCGCCAGC CAACCTGACC
GCGCTGCGCG AACTGGCAAT GCAGGAAGCG GCCGACCGCG TCGATAGCAG CCTGCGCGAA
GCACGGGCGG CACGCGGCGA GAGCAACCTG CCGCTGCGGC GTGGCGTATT GGTGGCCATT
GATGGCGGCG GCCAGAGCGA ATACCTGGTG CGGGTGGCGC GACGCATCGC CGAACGCCGC
GACGCGCCGT GGACGGTGGT GACCGTGCAG GGCCGGCGCC AGGACGAGGC GACCCGGCGC
GAGATCGATG CCGCGTTCGC GCTGGCACGA CGACTGGGCG GCGACGCCGA GCTGCTGCAT
GGTTCGAGCA TTGCCGATGC CCTGCTCGAC CATGCCGCAC ACAACGGCGT ATCGACCCTG
GTCCTGGGCC GCACCCGTGA ACGGCCGCTG GCGCGGATGT TCAACCGCAC CCTGACCCAG
CAGCTGATCC AGCGCGGCGC GCATTACGAG ATCACCATCA TCAGCACGCC GCAGGCGCGC
GCGCGTTCCC GCCGCGAGGG CCTGCTGCCA CCGGTGCGCG GTATCAGCCA TGAGCCAGCG
CAGGCGCTGA TCGCCACCGC ACTGGCCTGC GCAGTGGCGT GGCTGGCCGA GCGCTGGGTC
GGCATGGCCG ACCTGTCGAT GGTGTTCATC GTGGCGGTGG TGGTGGTGGC CGCGCGTACG
CGCGCCAGCG TGGCGGTGAT GGCGGCGATC CTGTGTTTCC TCGCCTACAA CTTCCTGTTC
ATCGCGCCGC GCTTCACCTT CGCCATTGGT GCGCGCCAGG GCGTGATCAC CGTGTTCCTG
TTCCTGGCCG CCGCCTTGGT GGCCGGACGG CTGGCCTCGC GCCTGCGCAT GCAGGTGATC
GCGCTGCGTG CAGCCAACCG CCATGCGCGT GCGCGCCAGC AGCTGGGCCG TCAGCTCGCC
AGTGCGGCCG GCAATGGCGA GGTCGCGCAG GCCGGCAGGC TGGCGCTGGA GCAGGCGATG
GACGTTCCGG CATGGCTGCG CATTGGAACA GACACCGCGG CCGGTGGTCG CAGCCAGCCG
GGGGACACCG ATCTGGCCGC CGCCGACTGG GCGCTGCGCC ATGGCCAGCC CAGCGGCCGC
TTCACCGATA CCCTGGCCGG TGCGCAGTGG TGGTTCCTGC CACTGCTGGA TGGCGAGGAC
CGCGCCATTG GCGTGGCCGG CCTGTACCTG CCCGGCGCGC AGGCGCGCCT GCTGCCGGAG
CAACGGCAGC TGGCCGAGGC AATGGTCGAT GACATCGCCC AGGCCGCGCT TCGCACACGG
CTGGTGGCCG AACTGGAACA GGCGCACGTC AGCAACGAGA CCGAGCGGTT GCGCTCGGCC
CTGCTCTCTT CGGTGTCGCA CGACCTGCGC TCGCCACTGG CGGCGATGAT CGGTTCGGCC
GACAGCCTGG CCAGCTACGG CGCGGCAATG GACACGACCG ATCGCCGTGC CCTGCTCGAT
ACCATCCTGG TCGAAGGCGA ACGCCTGGAC CGCTATATCC AGAACCTGCT GGACATGACC
CGGCTTGGCC ACGAAGGGTT GAAGATCAAC CGCGACTGGA TCGGCGTGGA CGAACTGATC
GGCTCGGCAG CGCGACGCCT GCAGCGCTAT CAGCCGAAGG TGCGGCTGGA GCTCGACATT
CCTTCCTCGC TGGCGCCGAT CTGGGTGCAT CCGGCGCTGG TCGAACAGGC GGTGTTCAAC
GTGATGGAGA ACGCGGCCAA GTTCTCGCCG CCCGATGCCG CCGTGCAGGT ACAGGCGCGC
GAGCTGGACG GCCAGCTGCG CATCGACGTG ATCGATGCCG GCCCCGGCAT TCCCGACGAC
GAGCGTGCGC GCATCTTCGA CATGTTCTAC AGCGTCGAAC GCGGTGACCG TGGCCGCCAT
GGCACCGGCC TGGGCCTGAC CATCTGCCAG GGCATGATCG GCGCGCATGG CGGCAGCGTG
CAGGCGCTGC CCGGACGCGA TGGTCGCGGT ACCCTGATCC GCATCACCCT GCCCCTGCTC
AAGCCAGCCT CCCACGATGA GTCCGACCCC GATTGA
 
Protein sequence
MTAAPMTDAR TRQADALVEG LQREAGGKLT VFLGAAPGVG KTYTMLTRAQ EQLRRGVDLV 
VGLVETHGRA DTQALLEGLP QLPLKEVAYH GHSLQEMDLD AVLARHPALV LVDELAHRNA
PGSRHERRWQ DVMELLDAGI DVWTTVNIQH LESLNDVVMR ITGVRVSETV PDGVLDRLHD
IVLVDLPPRE LIARLQQGKV YVPEQAAQAL QAFFSPANLT ALRELAMQEA ADRVDSSLRE
ARAARGESNL PLRRGVLVAI DGGGQSEYLV RVARRIAERR DAPWTVVTVQ GRRQDEATRR
EIDAAFALAR RLGGDAELLH GSSIADALLD HAAHNGVSTL VLGRTRERPL ARMFNRTLTQ
QLIQRGAHYE ITIISTPQAR ARSRREGLLP PVRGISHEPA QALIATALAC AVAWLAERWV
GMADLSMVFI VAVVVVAART RASVAVMAAI LCFLAYNFLF IAPRFTFAIG ARQGVITVFL
FLAAALVAGR LASRLRMQVI ALRAANRHAR ARQQLGRQLA SAAGNGEVAQ AGRLALEQAM
DVPAWLRIGT DTAAGGRSQP GDTDLAAADW ALRHGQPSGR FTDTLAGAQW WFLPLLDGED
RAIGVAGLYL PGAQARLLPE QRQLAEAMVD DIAQAALRTR LVAELEQAHV SNETERLRSA
LLSSVSHDLR SPLAAMIGSA DSLASYGAAM DTTDRRALLD TILVEGERLD RYIQNLLDMT
RLGHEGLKIN RDWIGVDELI GSAARRLQRY QPKVRLELDI PSSLAPIWVH PALVEQAVFN
VMENAAKFSP PDAAVQVQAR ELDGQLRIDV IDAGPGIPDD ERARIFDMFY SVERGDRGRH
GTGLGLTICQ GMIGAHGGSV QALPGRDGRG TLIRITLPLL KPASHDESDP D