| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0159 |
|---|
| Symbol | |
|---|
| ID | 6477790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 200583 |
|---|
| End bp | 201776 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642729292 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002026547 |
|---|
| Protein GI | 194363937 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGGT CCCGACTGCG TGTGAGTGCC ATGGCTTTGG ATCCGTACGA CCTGTTCGAT
GTCCGTTCCC TGCTCAGCGA GGAAGAGCGC GCGGTGCAGG AGAGCGTGGC CCGCTTCACC
GACGAGCGCG TGCTGCCGAT CATCGGCGAT GCCTTCGACC AGGCGCGCTT CCCGTCGGAA
CTGGTGCCTG AGATCGCCTC CTTGGGCCTG CTCGGTGCGA CCCTGCCCGG CGAATACGGC
GGTGGCGACC TCGGCGCGGT CAGTTACGGC CTGATCTGCC AGGAGCTGGA ACGCGGCGAC
TCAGGCCTGC GTAGTTTCGT GTCGGTGCAG AGCTCACTGT GCATGTACCC GATCTACGCC
TACGGCAGTG AAGAACAGCG CCGGCAGTGG CTGCCGGCGA TGGCGCGCGG TGAGCTGATC
GGCTGCTTCG GCCTGACCGA GGCGCATGGC GGTTCCGATC CGGCCAGCAT GAAGACCCGC
GCGGTGCGCG ATGGCGACGA CTGGCGCATC AACGGCAGCA AGATGTGGAT CACCAGCGGC
CCGGTGGCCG ACCTGGCCAT CGTCTGGGCG CAGACCGAGG ACGGCATCCA GGGCTTCGTG
CTGGAAAAGG GCATGCCGGG GTTCACCACG CAGGAGATCA AGCACAAGAT GAGCCTGCGT
GCGTCGCTGA CCGGTGCGCT GTTCTTCGAC GACGTGCGCG TGCCCGACAG CCATCGCCTG
CCCAACGTGA AGGGCCTGAA GGGACCGCTG GGTTGCCTGA CCCAGGCGCG TTTCGGCATC
AGCTGGGGGC CGATCGGTTC GGCCATTGCC TGCCTGGACG AAGCGCTGGG CTATGCCAAG
GAGCGCGTGT TGTTCGGCCG CCCGCTGGCC GCCACGCAGA GCGCACAGAT CAAGCTGGCC
GAGATGGCAC GCCGCATCAC CATGGCGCAG CTGCTGGCGT TGCAGCTCGG ACGCCTGAAG
GAAGCCGGCC AGCTGCAGCC ACAGCAGGTG AGCCTGGCCA AGTGGAACAA CTGCCGCATG
GCGATCGACA TCGCCCGCGA ATGTCGCGAT CTGCTGGGCG GCGCCGGCAT CACCACCGAG
CATGTAGCGA TCCGGCATGC GCTGAACCTG GAATCGGTGA TCACCTATGA AGGCACCGAG
ACCGTGCACC AGCTGGTGAT CGGCCGCGAG CTGACCGGCA TCAACGCGTT CTGA
|
|---|
| Protein sequence | MSGSRLRVSA MALDPYDLFD VRSLLSEEER AVQESVARFT DERVLPIIGD AFDQARFPSE
LVPEIASLGL LGATLPGEYG GGDLGAVSYG LICQELERGD SGLRSFVSVQ SSLCMYPIYA
YGSEEQRRQW LPAMARGELI GCFGLTEAHG GSDPASMKTR AVRDGDDWRI NGSKMWITSG
PVADLAIVWA QTEDGIQGFV LEKGMPGFTT QEIKHKMSLR ASLTGALFFD DVRVPDSHRL
PNVKGLKGPL GCLTQARFGI SWGPIGSAIA CLDEALGYAK ERVLFGRPLA ATQSAQIKLA
EMARRITMAQ LLALQLGRLK EAGQLQPQQV SLAKWNNCRM AIDIARECRD LLGGAGITTE
HVAIRHALNL ESVITYEGTE TVHQLVIGRE LTGINAF
|
|---|
| |