Gene Smal_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0119 
Symbol 
ID6477668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp158433 
End bp159593 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content68% 
IMG OID642729252 
ProductMltA domain protein 
Protein accessionYP_002026507 
Protein GI194363897 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0707409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA TCATCGCCCC CCTGAGCCGC ACGAGCTTGA GCCTTCTTGC GCTGGCCGTG 
CTTGCGGCCT GCAGCACCAC CGGCACCCGT CCCGAAGCAC CGCCAGCACC AATCAAGCCT
GCCGCCACCT ACGCCAAGGT TGAATGGAGT GCGCTGCCGC CGGTTTCCGA TACCGATCTG
CAGGCCGGCT TCGTCGCCTG GCGCAGCAGT TGTGCCAGGT TGAAGAACGA CGCGGTCTGG
GCCAAGCCCT GCACCACGGC TGCAGCAGTG AACGACAAGG ACCCTGCCGC GATCCGCCAG
TTCCTGCAGC GCGACCTCGA TGTCTACGCG CTGCGTGCCG GGGGGCACCA GGCTGATGGG
CTGATCACCG GCTACTACGA GCCGATCTAC CCCGGCAGCC TGACCCGAAC CGACAAGGCC
ACCGTGCCGG TGTACGGCAC GCCAGATGAC CTGATCGTGG TGCAGCTGGA CAGCGTCTAC
CCGGAACTGA AGGGCAAGCG CCTGCGCGGG CGCGTCGAAG GCAAGGTGCT CAAGCCCTAT
GACGACGCCG GTACCATCGC GGCCAAGGGC GCCAAGGCCC CGGTGCTGGC CTGGCTGACC
GATCCGATGG ACCTGCAGTT GCTGCAGATC CAGGGCTCGG GCCGGGTGCG CCTGGCCGAT
GGCAAGCAGG TGCGGCTGGC CTATGCCGAA CAGAACGGCC ACCCGTACCG CGCGATCGGC
CGCTGGCTGG TGGACCAGGG CCAGCTGAAG AAGGAAGACG TGACCATGGA TGCGATCCGC
GCATGGGCCA GGGCCAACCC TTCCCGCGTG CCGGAACTGC TGCGCAGCAA TCCCAGCTAC
GTGTTCTTCG TGCGCAACCC GGACAGCCCG GAAGGCCCCC GCGGTTCACT GAACGTGCCG
CTCACCGCCG GCTACAGCGT GGCGGTGGAC CGTACCGTGG TACCGCTGGG CAGCCTGTTG
TGGCTGTCCA CCACGCGTCC GGATGGCAGC CCGGTGGTAC GCCCGGTGGC CGCGCAGGAC
ACCGGCGGTG CCATTGCCGG CGAAGTACGC GCGGACCTGT ACTGGGGCAG CGGCGACGCC
GCAGGCAAGC TGGCCGGTGA CATGAAGCAG AAGGGCAACA TCTGGATGCT GTGGCCGAAG
GGCTCCCCCT TGCCGAAGTA G
 
Protein sequence
MKDIIAPLSR TSLSLLALAV LAACSTTGTR PEAPPAPIKP AATYAKVEWS ALPPVSDTDL 
QAGFVAWRSS CARLKNDAVW AKPCTTAAAV NDKDPAAIRQ FLQRDLDVYA LRAGGHQADG
LITGYYEPIY PGSLTRTDKA TVPVYGTPDD LIVVQLDSVY PELKGKRLRG RVEGKVLKPY
DDAGTIAAKG AKAPVLAWLT DPMDLQLLQI QGSGRVRLAD GKQVRLAYAE QNGHPYRAIG
RWLVDQGQLK KEDVTMDAIR AWARANPSRV PELLRSNPSY VFFVRNPDSP EGPRGSLNVP
LTAGYSVAVD RTVVPLGSLL WLSTTRPDGS PVVRPVAAQD TGGAIAGEVR ADLYWGSGDA
AGKLAGDMKQ KGNIWMLWPK GSPLPK