| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0093 |
|---|
| Symbol | |
|---|
| ID | 6477642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 113031 |
|---|
| End bp | 114353 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642729226 |
|---|
| Product | HipA N-terminal domain protein |
|---|
| Protein accession | YP_002026481 |
|---|
| Protein GI | 194363871 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0648821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0261273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACGC TGCGGGTCTG GATGAATGGT GTCGAGGTCG CGCTCTGGGA TGATGTCCGG
AGCGGCTCTT CCCGGCTTTC GTACGTCGAC TCGTGGATCA GCTCCGCCCA GTCCCGGCCG
TTGTCACTCT CACTGCCCCT GCTCCCGGAG GGCGAGAGCC ATCGGGGCAA TGTCGTCAAC
AACTACTTCG ACAACCTTCT TCCCGACAAC GGTGTCATCC GCAACCGGAT CCGCGACAGG
TTCTCCACGC GCAGCAGCGA CACATTCGAT CTTCTCGAAG CCATTGGCCG GGATTGCGTC
GGCGCAGCGC AACTGCTGCC GCTTTCGCAT ACACCGGGGG ACATCCAGCA GATTACGTGC
GAAGCGTTGG ACGAATCAGG CGTCGCTGCG ATCCTGCGTC AGGTGACGAC AGGGAACCTG
CCTGGCGCAC CCACCAGTGA TGATGCGTTC CGCATATCCA TCGCCGGTGC GCAGGAGAAG
ACGGGACTTC TGCTGCATGC TGGCCAGTGG TGCATTCCTA CCGGCAGTAC CCCATCCACC
CATATCTTCA AGCTGCCGCT TGGCATTGTG GGCAACATGC GGGCGGACAT GCACCAATCC
GTCGAGAACG AATGGCTGTG CATGCAGCTG CTTTCCGCCT TTGGAATCCC CGTTGCGAAT
ACGCAGATGG GACGCTTCAA GGACGAACGC GCGCTCATTG TGGAGCGATT CGACCGCCGC
CTTTCTGCGG ATCGCCGGTG GTGGCTGCGG CTGCCGCAGG AAGACATGTG CCAGGTCTTC
GGTCTGCCCG CCGCCAGGAA GTATGAATCC GATGGCGGCC CAGGCATCGT GACCATCATG
GATCTGCTTC GACAATCCGA GCATTTCAAG GATCGCGAGA CCTTCTTCAA GACGCAGATT
CTTTTCTGGA TGTTGGCTGC AACCGATGGA CATGCCAAGA ACTTCAGTGT CTACCTCGAA
GCCGATGGAC GCTTCCGCCT GACGCCCGTC TACGACGTAT TGTCGGTGCA TCCCATCCTG
GGCAGGGGGC CAAACCAGCT CGACCCGCGG AATGCACAGC TCGCCATGTC CGTCCAGGGC
AAGAACCACC ACCGGAAGCT GCACCTTGTG CGACGACGCC ACTGGAACGA AACCGCACGC
GCCTGTGGTG TCGCTGATGG TGCAGAGCCG TGGATCGAAG CGCTGATCGC AGCCGTCGAA
CCCGCCATCG AGCAGGTCAC GCGTCAGCTC CCAAGTGATT TCCCCGTAAA CGTGTCCGAA
CCCATTTTCA ACGGGCTGCG CGCTGCAGCG GCACGCCTTT CCAGCATGTC GCCGGACGCC
TGA
|
|---|
| Protein sequence | MGTLRVWMNG VEVALWDDVR SGSSRLSYVD SWISSAQSRP LSLSLPLLPE GESHRGNVVN
NYFDNLLPDN GVIRNRIRDR FSTRSSDTFD LLEAIGRDCV GAAQLLPLSH TPGDIQQITC
EALDESGVAA ILRQVTTGNL PGAPTSDDAF RISIAGAQEK TGLLLHAGQW CIPTGSTPST
HIFKLPLGIV GNMRADMHQS VENEWLCMQL LSAFGIPVAN TQMGRFKDER ALIVERFDRR
LSADRRWWLR LPQEDMCQVF GLPAARKYES DGGPGIVTIM DLLRQSEHFK DRETFFKTQI
LFWMLAATDG HAKNFSVYLE ADGRFRLTPV YDVLSVHPIL GRGPNQLDPR NAQLAMSVQG
KNHHRKLHLV RRRHWNETAR ACGVADGAEP WIEALIAAVE PAIEQVTRQL PSDFPVNVSE
PIFNGLRAAA ARLSSMSPDA
|
|---|
| |