Gene Smal_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0090 
Symbol 
ID6477639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp108437 
End bp110071 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content65% 
IMG OID642729223 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_002026478 
Protein GI194363868 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.42092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0324493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACAGAC GTGACTTCCT GGCCCTGACC GGGCTTACCG CTGGCGGCCT GATCGTGCCG 
TCGTTCTTCG GCAAGGCGAT CGCCGCCGAG CAACTGCAGT CGAGCCTCGA CCCCGCGCTG
AAAAAGCGCC TGGCCGACGC CGCCCTGCAG GCCGCGCGCA GCGCCGGCGC CACCTACTGC
GACGTGCGCA TCGGCCGCTA CCTGCGGCAG TTCGTGATCA CCCGCGAGGA CAAGGTGCAG
AACGTAGTGA ACACCGAGTC CACCGGTGTG GGCATCCGCG TGATCGTCAA CGGGGCCTGG
GGCTTCGCCG CCACCAATGC GCTGGGCACC GCCGACGTGG CCAGGGCCGC GCAGCAGGCC
GCGGCGATCG CCAAGGCCAA TGCCGGCGTG CAGACTGCTC CGGTACAGCT GGCCAAGGCG
CCGGGCGTCG GTGAGGTGAG CTGGCGCACG CCGATCCACA AGAATGCGAT GGAAGTGCCG
ATCAAGGACA AGGTCGGCCT GCTGCTGGAC GTCAACGCTG CGGCGATGGG CGCTGGTGCC
AGCTTCGTCA ATTCGATGCT GTTCCTGGTC AACGAACAGA AATACTTCGC CTCCACCGAT
GGCTCCTACA TCGACCAGGA CGTACACCGC ATCTGGGCGC CGATGACGGT CACCGCCATC
GACAAGACCA GCGGCAAGTT CCGCACCCGT TCGGGCCTGT CCTCGCCGAT GGGCCTGGGC
TACGAGTACC TGGACGGTGC CGCCGCCGGC AAGGTGGTCA GCCCCAATGG CGTGGTCAAC
TACAGCTCCT CCTACGACAT GAAGGAAGAC GCCATCGCGG CCGCCAAGCA GGCGCAGGAG
AAGCTGAAGG CACCGTCGGT GAAGCCGGGC AAGTACGATC TGGTGCTCGA CCCGTCGCAC
ACCTGGCTGA CCATCCACGA ATCGATCGGC CACCCGCTGG AACTGGACCG CGTGCTCGGT
TACGAAGCCA ACTACGCCGG CACCAGCTTC GCCACCCTGG ACAAGCGCGA ACAGCATTTC
CAGTACGGCA GCGAGCTGGT CAACATCTTC GCCGACAAGA CCCAGCAGGG CAGCCTCGGT
GCGGTGGCGT ACGACGACGA AGGCGTGAAG TGCAAGCGCT GGGACCTGAT CAGCAACGGC
AAGCTGGTGG ACTACCAGAC CATCCGCGAC CAGGCCCACA TCCTCGGCAA GACCGAGTCC
GATGGCTGCT GCTATGCCGA CTCGTGGTCC AGCGTGCAGT TCCAGCGCAT GGCCAACGTG
TCGATGGCGC CGGGCAAGAA GCCGCTGAGC GTGCCCGACC TGATCAAGGA CGTGGAGAAC
GGCATCTACA TCATCGGTGA CGGCTCGTTC TCGATCGACC AGCAGCGCTA CAACGCGCAG
TTCGGTGGCC AGCTGTTCTA CGAGATCAAG AACGGCCAGA TCACCCGCAT GCTGGAAGAC
GTGGCCTACC AGATCCGCAC GCCGGAGTTC TGGAATGCCT GCACCGCCGT GGCCGACGAG
CGCGACTACC GCCTGGGCGG TTCGTTCTTC GACGGCAAGG GCCAGCCGGG CCAGGTCTCG
GCGGTCTCGC ACGGTTCGTC GACCGCGCGC TTCAACGGCA TCAATGTCAT CAACACCGCA
CGCAGCCTCG GCTGA
 
Protein sequence
MHRRDFLALT GLTAGGLIVP SFFGKAIAAE QLQSSLDPAL KKRLADAALQ AARSAGATYC 
DVRIGRYLRQ FVITREDKVQ NVVNTESTGV GIRVIVNGAW GFAATNALGT ADVARAAQQA
AAIAKANAGV QTAPVQLAKA PGVGEVSWRT PIHKNAMEVP IKDKVGLLLD VNAAAMGAGA
SFVNSMLFLV NEQKYFASTD GSYIDQDVHR IWAPMTVTAI DKTSGKFRTR SGLSSPMGLG
YEYLDGAAAG KVVSPNGVVN YSSSYDMKED AIAAAKQAQE KLKAPSVKPG KYDLVLDPSH
TWLTIHESIG HPLELDRVLG YEANYAGTSF ATLDKREQHF QYGSELVNIF ADKTQQGSLG
AVAYDDEGVK CKRWDLISNG KLVDYQTIRD QAHILGKTES DGCCYADSWS SVQFQRMANV
SMAPGKKPLS VPDLIKDVEN GIYIIGDGSF SIDQQRYNAQ FGGQLFYEIK NGQITRMLED
VAYQIRTPEF WNACTAVADE RDYRLGGSFF DGKGQPGQVS AVSHGSSTAR FNGINVINTA
RSLG