Gene Smal_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0086 
Symbol 
ID6477635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp104470 
End bp105366 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID642729219 
Productprotein of unknown function DUF58 
Protein accessionYP_002026474 
Protein GI194363864 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.153516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0632534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCTG GTACGTCGTT GACCCTGCCA CCCGAACTGC GCGCGCGCCT GCGCCTGCTG 
CGGTTGCGGC CGCGCCTGGC CAGCGGTGCG AGCGGCATTG GCCAGCACGC CAGCCGCAGC
CGTGGTGCCG GCCTGGAGTT CGCCCAGTAC CGGGCCTACG AGCCGGGTGA CGAACTGCGC
CAGATCGACT GGAAGCTGTA TGCGCGCTCG GACCGCTTCT TCGTGCGCGA ATCCGAACGC
GAAAGCCCGA TCACGGTCTG GCTGCTGCTC GATGCCACCG CTTCGGCCGG TCAGGCCGAC
CGCGCGGCGC CGGAACGCAC GCGCTTGGAC CACATGCGCG GCGTTGCCGC CTGCCTGGTC
GAACTGGCCC TGCAGCAAGG CGACCGTTTC GGCCTGCTGG CGATCAATGG CGATGGACTG
CAGCTGGTGC CCGCAGCGAG CGGCGCACGC CAACGTGACC GCGTGCACCT TCAACTTCAT
GCGCTGCAGG CGCGCGGCGG CTGGCCATCG GCGGATCGAC TACGCCCGCT GTGGGAACGC
GTACGCCCCG GCGACATGCT GCTGGCCATT GGCGATGGCT TTGATGAAGC CGGCATCGTG
CTGCTGGAAC AACTGGCCAG CGCGCGCCGT GAAGTGGCCC TGCTGCAGAT CCTGACTGCC
GACGAACGCG ACTTCCCGTT CGATGCCGGC CACCGCTTCC GCGATCCGGA AACCGGCGAG
GAACTGCTGG GCGATGGTGC GGCGATCCGC GCCGACTACC TGCAGCGCTT CGCCGACGCA
CGCAGTGCGC TGCAGTCGCG CCTGCAGGCC AGCGGCATCG CCAGCGCCAC CGGCTGGCTC
GACCAGCCCC TGGACCAACC ACTGCAGGCG CTGTTTGGCC GTGGGGGCGG TGCATGA
 
Protein sequence
MNAGTSLTLP PELRARLRLL RLRPRLASGA SGIGQHASRS RGAGLEFAQY RAYEPGDELR 
QIDWKLYARS DRFFVRESER ESPITVWLLL DATASAGQAD RAAPERTRLD HMRGVAACLV
ELALQQGDRF GLLAINGDGL QLVPAASGAR QRDRVHLQLH ALQARGGWPS ADRLRPLWER
VRPGDMLLAI GDGFDEAGIV LLEQLASARR EVALLQILTA DERDFPFDAG HRFRDPETGE
ELLGDGAAIR ADYLQRFADA RSALQSRLQA SGIASATGWL DQPLDQPLQA LFGRGGGA