Gene Smal_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0085 
Symbol 
ID6477634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp103352 
End bp104473 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content70% 
IMG OID642729218 
Producthypothetical protein 
Protein accessionYP_002026473 
Protein GI194363863 
COG category 
COG ID 
TIGRFAM ID[TIGR02226] N-terminal double-transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.160108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.101307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC TGTTCCCATT GGGTCTGGCC GCGCTCGCCG CATGGCTGCT GCCGCTGCTG 
ATCCACCTCG CCCGCCGCCA TCCGTACACA CCGCTGGATT TCGCTGCGCT GCGCTGGCTG
CGCGCACAGA TCCGGCCACG CCAGCGCATC CGCTTCGATG ACTGGCCATT GCTGCTGGTG
CGCCTGCTGT TGCTTGCCGC GCTGGCTTTG CTGCTGGCAC GGCCTGCGTT GACCGGGCCT
GCACCAGCCC CCACTGCGTG GACGGTCGTT GCTCCAGGGC TGGACGCGAC CGCTCTGCGC
GGCACCGCCG AAGCGGGCAA CTGGCATTGG CTGGCGCCGG GCTTCCCGGC CATTGATCAA
GTGCCACCTG CGTCCACGGC CTCCCTGCCC AGCCTGCTGC GCGAACTGGA CGCGCAGCTG
CCCGTTGGCA CCGCATTGAC CGTGCACGTT CCCGATCCCC TGCCCGGCCT GGATGGCGCC
CGCCTGCAGC TGTCGCGTGA GGTGCAATGG CACACGCAGC CGATGCCGGT CACTGCGCAA
CCGCGTGCCG CAACGTCGCC GCGCCTGCGC GTGCACAGCG ATGCTTCGGC CGCTGCCCAG
CACTGGTTGA ATGCACTGCA GCGCGCGTGG GGCGTGCAGG CGCCGCTCGC TCCTCTGGTG
GCGGATGCCC TGCCCGAACG CGGCGAGATC GGCGTATGGA GCCGCAACGA CGCACTGCCG
GCGAACTGGC AGGCGTGGCT GCAAGATGGC GGCAGTGTGC TGATCGCCGC CAAGCCCGCC
ACGGAAGCCC AGGTCCTGCT GCGCAGCGCC GAAGGCGTGC CGCTGTTGTG GCAGCAACGT
GTCGGCCTTG GCCGCCTGCT GTCACTACCG GGTGATTGGG ATGCCGCCAG CAACACCGCG
CTGCGCGATC CACAGCTGCC GCGTTCCCTG CTGCTGGCCC TGCAGCCGCC GCCGTCGCCA
CGCGTGGGCG ATGCACAGGA CCAGGCGCCG CGCCAGATTG CACTGCCCGC CGCAGCATCG
CCGGTGCGTG AGCCCACGGC GTGGCTTCTG CTGGCAATCG TGCTGCTGTT CGCACTGGAA
CGCTGGATGG CCAGCAGCGC GCGGCGCAGG GCGATCGCAT GA
 
Protein sequence
MTLLFPLGLA ALAAWLLPLL IHLARRHPYT PLDFAALRWL RAQIRPRQRI RFDDWPLLLV 
RLLLLAALAL LLARPALTGP APAPTAWTVV APGLDATALR GTAEAGNWHW LAPGFPAIDQ
VPPASTASLP SLLRELDAQL PVGTALTVHV PDPLPGLDGA RLQLSREVQW HTQPMPVTAQ
PRAATSPRLR VHSDASAAAQ HWLNALQRAW GVQAPLAPLV ADALPERGEI GVWSRNDALP
ANWQAWLQDG GSVLIAAKPA TEAQVLLRSA EGVPLLWQQR VGLGRLLSLP GDWDAASNTA
LRDPQLPRSL LLALQPPPSP RVGDAQDQAP RQIALPAAAS PVREPTAWLL LAIVLLFALE
RWMASSARRR AIA