Gene Smal_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0052 
Symbol 
ID6477601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp60347 
End bp60997 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID642729185 
Productprotein of unknown function DUF480 
Protein accessionYP_002026440 
Protein GI194363830 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.102804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.491736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CCACCCAGAC CCCCGACATC CCCCTGCTCG ACGCCGTGCA GGCCCGCCTG 
CTGGGTTGCC TGGTAGAGAA GGAAGCGACC ACCCCGGACA CCTATCCGCT GACGGTCAAT
GCCGCCCAAT CAGCCGCCAA CCAGAAGACC GCCCGCGAGC CGGTGATGAA CATCGACGCT
GGCGGCGTGC AGCACGCACT GCGCCAGCTG GAGACGCTGG GGCTGGCTCG CCAGCACTTC
TCCTCGCGCG CCGACCGCTA CGAGCACCGC CTGCAGGCCG CGCTGGACCT GACCCGGCAG
CAGACCGTGC TGCTGGCGCA GCTGCTGCTG CGCGGGCCGC AGACCCTGGG CGAGCTGGTC
ACCCGCAGCG AACGCCTGCA CCGCTTCGCC GACGCCGACG AAGCCCGCCA CGCCATCGAG
CGCCTGCAGC AGCGTGCGCT GCTGGTAGTG CTGCCGCGCG CCAGCGGCCA GCGCGAAGAC
CGCTACATGC ACCTGCTGTG CGGTGAAGTG GACGGCGCTG CATTGGCTGC GAAGTACGCC
AGCAGCGGCG GTGGCAGCGA AGCAGCCGAT CCCGGCCTGG CCGAGCGCGT GGCGCAGCTG
GAAGCAGCCG TGGCCGAGCT GCAGGCGCAG CTGGCCGAAC TGCGCGGTTG A
 
Protein sequence
MTDSTQTPDI PLLDAVQARL LGCLVEKEAT TPDTYPLTVN AAQSAANQKT AREPVMNIDA 
GGVQHALRQL ETLGLARQHF SSRADRYEHR LQAALDLTRQ QTVLLAQLLL RGPQTLGELV
TRSERLHRFA DADEARHAIE RLQQRALLVV LPRASGQRED RYMHLLCGEV DGAALAAKYA
SSGGGSEAAD PGLAERVAQL EAAVAELQAQ LAELRG