Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0047 |
Symbol | |
ID | 6477596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 55261 |
End bp | 55881 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729180 |
Product | thymidine kinase |
Protein accession | YP_002026435 |
Protein GI | 194363825 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.126772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.139333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC TCTACTTCTA CTACTCGGCG ATGAACGCCG GCAAGACCAC GACCCTGCTG CAGAGCGCCC ACAACTACCG CGAGCGCGGC ATGCGGGTGG CGATCCTGAC CCCGCGCCTG GATGATCGTG CCGGCGCCGG CGTGGTCGCT TCGCGGATCG GCCTGCGTGC CGATGGAATG GCCTTCGACC GCGATACCGA CCTGCAACGC TGGGTGGAGC ACGATCTGGC GACGAACGGA CCGATGGGCT GCGTGCTGGT GGACGAGGCG CAGTTCCTCA CCCGTGCCCA GGTCTGGCAG CTCAGCGAAA TCGTGGATCA GCTGCGGATT CCGGTGCTGT GCTACGGCCT GCGCACCGAC TTCCGCGGTG AGCTGTTCGA AGGCAGCCAG TACCTGCTGG CCTGGGCCGA CGAGATGCAG GAGATCAAGA CCATCTGCCA CAGCGGAAAG AAGGCGACGA TGACGGTGCG CGTGGACGAG CATGGCCGCG CCGTGCAGGA CGGCCCGCAG GTGGAGATCG GCGGCAACGA CCGCTACGTG TCGGTCAGCC GTGCAGAGTT CAAGAAGATC ACCCGCGGCG AAGGCCGGAT CGATCCGGCG CAGGCGCCCC TGCCGCTGTA A
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Protein sequence | MAKLYFYYSA MNAGKTTTLL QSAHNYRERG MRVAILTPRL DDRAGAGVVA SRIGLRADGM AFDRDTDLQR WVEHDLATNG PMGCVLVDEA QFLTRAQVWQ LSEIVDQLRI PVLCYGLRTD FRGELFEGSQ YLLAWADEMQ EIKTICHSGK KATMTVRVDE HGRAVQDGPQ VEIGGNDRYV SVSRAEFKKI TRGEGRIDPA QAPLPL
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