| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0046 |
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| Symbol | mdoD |
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| ID | 6477595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 53134 |
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| End bp | 54738 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642729179 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002026434 |
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| Protein GI | 194363824 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.11724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAC GCGACTTCAT CCGCAATGCC TCCCTCGCCC TGGCTGCATT CGGCCTGCCG
TCCCTGCCCG CGTGCGCGGC CAGCAAGAGC GGCCAGATGG GCCTGCGCCG CCTCGGCCAG
CCGCAGCCGT TCGACTTCGC CACCCTGAAG GGCCAGGCGC GCGCGCTGGC ACAGGCACCC
TACAAGAGCC ACAAGCGGGT GCTGCCTGGG CGTCTGGAAG GCCTGGACTG GGACCAGTAC
CAGTCGATCG GCTACCGCCA GGACCATGCA CTGTGGGCTG ACCAGCCGGG CAAATTCCAG
GCCAAGTTCT TCCACCTGGG CCTGTACTTC CACTCGCCGG TGCGCATGTT CGACGTGGTC
GACGGCAAGG CGCAGGAGCT GGCCTATGAC GGCGCGGCGT TCAACTACGG CAAGAGCGGC
ATCAAGGACG GCGAGCTGCC GGCCGATCTG GGCTTCGCCG GCTTCCGCCT GAACACCCGC
AAGGACACCG ACCGCGACTT CGCCGCCTTC CTCGGCGCCA GCTACTTCCG CGCGGTCGGC
AAGGAAGGCC AGTACGGCCA GTCCGCGCGC GGCCTGGCGA TCGACACCGG CATGGGCAAG
CCGGAGGAAT TCCCGGACTT CATCGCCTAC TACCTGGAGC AGCCATCGGC CGATTCGGAG
ACGATCGTGG TCTACGGCCT GCTGGATTCG CCCAGCGTGG CCGGTGCCTA CCGCTTCGCC
ATCACCAATG GTGATGTGCT GCTGATGGAC ATCGACAGCG CGCTGTACCC GCGCAAGGCG
ATCGAGCGGC TGGGCATCGC CCCGTGCACC AGCATGTACC AGGTGGGCGA GAACGACCGC
CGCATGGCAT GGGACTGGCG CCCGGAGATC CACGACACCG ATGGCCTGTC GCTGTGGACC
GGTGCCGGCG AATGGATCTG GCGACCGCTG CTGAATCCGC GCAACCTGCG CTTCAACATG
TTCGTCGACC GCAACCCGCG TGGTTTCGGC CTGCTGCAGC GCGACCGCAA CTTCGACCAC
TACCAGGACG ACGGCGTGTT CTACGAGAAG CGCCCCTGCC TGTGGGTGGA GCCGAAGGGC
GAATGGGGCG AGGGCTCGGT GCAGCTGGTG GAGATTCCCA CCGTGGACGA GACCTTCGAC
AACATCGTGG CGTTCTGGAA CCCGAAGGAA AAGCCGCAGC CGGGCCAGGA GCTGCTGGTC
GGCTACCGCC TGTACTGGGG CGCCGAACCG CCGGCACGGC CGCCGCTGGC GCACTGCGTG
GCCAGCCGCA CCGGCCTGGG CGGCGTGGTC GGCAAGAAGC GCGAGTATTT CAGCTGGCGC
TTCGCGGTGG ACTTCGAAGG CGGCGAACTG GCGAGGCTGA TCGACAAGGG CGAGGTCGAG
GCCGTGGTGG AAGCCAGCCG CGGCCGGGTC GAGATCGTGT CGGCGCGCCC GCTGCGCGAG
ATCAACGGCT ACCGCGCGAT GTTCGACCTG GTGCCGCCGG AGGGCAGCAC CGAGCAGATC
GACATCCGCC TGTTCCTGCG CAGTGGCGGC AAGACCCTTA CCGAGACCTG GCTGTACCAG
TACACCCCGC CGCCGGCGGG TGCGCCGGAG CGCACGCTGT ACTAA
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| Protein sequence | MQRRDFIRNA SLALAAFGLP SLPACAASKS GQMGLRRLGQ PQPFDFATLK GQARALAQAP
YKSHKRVLPG RLEGLDWDQY QSIGYRQDHA LWADQPGKFQ AKFFHLGLYF HSPVRMFDVV
DGKAQELAYD GAAFNYGKSG IKDGELPADL GFAGFRLNTR KDTDRDFAAF LGASYFRAVG
KEGQYGQSAR GLAIDTGMGK PEEFPDFIAY YLEQPSADSE TIVVYGLLDS PSVAGAYRFA
ITNGDVLLMD IDSALYPRKA IERLGIAPCT SMYQVGENDR RMAWDWRPEI HDTDGLSLWT
GAGEWIWRPL LNPRNLRFNM FVDRNPRGFG LLQRDRNFDH YQDDGVFYEK RPCLWVEPKG
EWGEGSVQLV EIPTVDETFD NIVAFWNPKE KPQPGQELLV GYRLYWGAEP PARPPLAHCV
ASRTGLGGVV GKKREYFSWR FAVDFEGGEL ARLIDKGEVE AVVEASRGRV EIVSARPLRE
INGYRAMFDL VPPEGSTEQI DIRLFLRSGG KTLTETWLYQ YTPPPAGAPE RTLY
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