Gene Smal_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0042 
Symbol 
ID6477518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp49601 
End bp50803 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content68% 
IMG OID642729175 
Productfatty acid desaturase 
Protein accessionYP_002026430 
Protein GI194363820 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00931019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGATG CCCTGATGTC ACTGTTGACC GGTGGTGTGC TCGGCCTGGG CTGGTGGGCC 
ATGCTGGCGG TGCTGCTGGT CTTCACCCAG ATCACCATCT TCTCGGTGAC CTTGTACCTG
CACCGCAGCC AGGCTCATCG CGGGGTCGAT TTCCACCCGG CGCTGGCCCA TGTGTTCCGC
TTCTGGCTGT GGCTGACCAC CTCGATGATC ACCCGCGAGT GGGTGGCCAT CCACCGCAAG
CACCACGCGA AGGTGGAAAC CGAGGACGAC CCGCACAGCC CGGTCACCCG CGGCATCGGC
AAGGTGTTCT GGCACGGCGT GGAGCTGTAC CGCGAAGCCC GCGGCCAGCG CGCGGACATC
GAGCAGTACG GGCGCGGCAC CCCGGATGAT GCGATCGAGC GCCGCCTGTA TACCCCGCAT
GCCACGTTGG GGCCGGTGCT GCTGTTCGCG ATCAACACGG TGTTGTTTGG CCTGCCGGGC
GTGGCCCTGT GGGCGATCCA GATGGCGTGG ATTCCGTTCT GGGCGGCCGG CGTGGTCAAT
GGCCTGGGCC ACTGGTGGGG CTACCGCAAC TACGAGTCGG CCGATACCTC CACCAACCTC
ACGCCGTGGG GGTTCTGGAT CGGTGGCGAG GAGCTGCACA ACAATCACCA CGCCTTCCCC
AGCTCGGCGC GCTTCGCGAT GCGGCGCTGG GAGTTCGATA TCGGCTGGAG TGCGATCCGC
CTGCTGCAGG CGCTGCGCCT GGCCAAGGTG CTGCGGGTGG TGCCGGCCAT GGACGTGCGC
CCGAACATCG CGGTGCCCGA TGCCGAAACC CTGAAGGCGC TGCTGTCGCA CCGCTTCCAG
GCGATGACCG ATTACCAGCG CAATGTGTTC ATGCCGGCTC TGCGCGAGGA AGCCGTGCAG
GCTGGGGCCA AGCTGCGCCG CCTGCTGCCG CGCCGGCTGC GCCGTGGCCT GGTCAACGAT
GGCCGCTGGC TGAAGCCGGA CAGTCGTGCC CAGCTCAGCG AATGGGTGGC GCAGCGCCCG
CGCATCCGCA CACTGGTCGA GTACCGCGGG CGCCTGGCCG CATTGCTGGA AGCCCGCGGC
CACGATGCGG CCGAGCGGCT GCACCAGCTG CAGGCGTGGT GCCGCGAGGC CGAGGAAAGC
GGTATCGCCG CGCTGCAGGC GTATGCCGCG CGATTGAAGG GCTACAGCCT GGTGGGCGCG
TGA
 
Protein sequence
MPDALMSLLT GGVLGLGWWA MLAVLLVFTQ ITIFSVTLYL HRSQAHRGVD FHPALAHVFR 
FWLWLTTSMI TREWVAIHRK HHAKVETEDD PHSPVTRGIG KVFWHGVELY REARGQRADI
EQYGRGTPDD AIERRLYTPH ATLGPVLLFA INTVLFGLPG VALWAIQMAW IPFWAAGVVN
GLGHWWGYRN YESADTSTNL TPWGFWIGGE ELHNNHHAFP SSARFAMRRW EFDIGWSAIR
LLQALRLAKV LRVVPAMDVR PNIAVPDAET LKALLSHRFQ AMTDYQRNVF MPALREEAVQ
AGAKLRRLLP RRLRRGLVND GRWLKPDSRA QLSEWVAQRP RIRTLVEYRG RLAALLEARG
HDAAERLHQL QAWCREAEES GIAALQAYAA RLKGYSLVGA