Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0042 |
Symbol | |
ID | 6477518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 49601 |
End bp | 50803 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642729175 |
Product | fatty acid desaturase |
Protein accession | YP_002026430 |
Protein GI | 194363820 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00931019 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGATG CCCTGATGTC ACTGTTGACC GGTGGTGTGC TCGGCCTGGG CTGGTGGGCC ATGCTGGCGG TGCTGCTGGT CTTCACCCAG ATCACCATCT TCTCGGTGAC CTTGTACCTG CACCGCAGCC AGGCTCATCG CGGGGTCGAT TTCCACCCGG CGCTGGCCCA TGTGTTCCGC TTCTGGCTGT GGCTGACCAC CTCGATGATC ACCCGCGAGT GGGTGGCCAT CCACCGCAAG CACCACGCGA AGGTGGAAAC CGAGGACGAC CCGCACAGCC CGGTCACCCG CGGCATCGGC AAGGTGTTCT GGCACGGCGT GGAGCTGTAC CGCGAAGCCC GCGGCCAGCG CGCGGACATC GAGCAGTACG GGCGCGGCAC CCCGGATGAT GCGATCGAGC GCCGCCTGTA TACCCCGCAT GCCACGTTGG GGCCGGTGCT GCTGTTCGCG ATCAACACGG TGTTGTTTGG CCTGCCGGGC GTGGCCCTGT GGGCGATCCA GATGGCGTGG ATTCCGTTCT GGGCGGCCGG CGTGGTCAAT GGCCTGGGCC ACTGGTGGGG CTACCGCAAC TACGAGTCGG CCGATACCTC CACCAACCTC ACGCCGTGGG GGTTCTGGAT CGGTGGCGAG GAGCTGCACA ACAATCACCA CGCCTTCCCC AGCTCGGCGC GCTTCGCGAT GCGGCGCTGG GAGTTCGATA TCGGCTGGAG TGCGATCCGC CTGCTGCAGG CGCTGCGCCT GGCCAAGGTG CTGCGGGTGG TGCCGGCCAT GGACGTGCGC CCGAACATCG CGGTGCCCGA TGCCGAAACC CTGAAGGCGC TGCTGTCGCA CCGCTTCCAG GCGATGACCG ATTACCAGCG CAATGTGTTC ATGCCGGCTC TGCGCGAGGA AGCCGTGCAG GCTGGGGCCA AGCTGCGCCG CCTGCTGCCG CGCCGGCTGC GCCGTGGCCT GGTCAACGAT GGCCGCTGGC TGAAGCCGGA CAGTCGTGCC CAGCTCAGCG AATGGGTGGC GCAGCGCCCG CGCATCCGCA CACTGGTCGA GTACCGCGGG CGCCTGGCCG CATTGCTGGA AGCCCGCGGC CACGATGCGG CCGAGCGGCT GCACCAGCTG CAGGCGTGGT GCCGCGAGGC CGAGGAAAGC GGTATCGCCG CGCTGCAGGC GTATGCCGCG CGATTGAAGG GCTACAGCCT GGTGGGCGCG TGA
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Protein sequence | MPDALMSLLT GGVLGLGWWA MLAVLLVFTQ ITIFSVTLYL HRSQAHRGVD FHPALAHVFR FWLWLTTSMI TREWVAIHRK HHAKVETEDD PHSPVTRGIG KVFWHGVELY REARGQRADI EQYGRGTPDD AIERRLYTPH ATLGPVLLFA INTVLFGLPG VALWAIQMAW IPFWAAGVVN GLGHWWGYRN YESADTSTNL TPWGFWIGGE ELHNNHHAFP SSARFAMRRW EFDIGWSAIR LLQALRLAKV LRVVPAMDVR PNIAVPDAET LKALLSHRFQ AMTDYQRNVF MPALREEAVQ AGAKLRRLLP RRLRRGLVND GRWLKPDSRA QLSEWVAQRP RIRTLVEYRG RLAALLEARG HDAAERLHQL QAWCREAEES GIAALQAYAA RLKGYSLVGA
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