Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0030 |
Symbol | |
ID | 6477506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 36026 |
End bp | 36682 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729163 |
Product | cysteine dioxygenase type I |
Protein accession | YP_002026418 |
Protein GI | 194363808 |
COG category | [R] General function prediction only |
COG ID | [COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.174778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000079419 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATGCGG GCGCGACGCG CGCGAACGCC AACATTCCTT TAACCATGCT CCGCTACAGT CAGGACATGG ACCTGCAGAC TTCTCCGTTT CCGCCGTTCC GTGGTCGCGA TCGGTTGATC GCCGCCGTCG ACGCGGCGAT GACCTCCGGT GATGCCGGGC GCATCACCGC CGACCTGCAG TTGGCACTGC AGGACGCCAT CGCAGACAGC CGCATCGAAC TTCCCGAGTG CGTGCACCGT CCGGTCGGTG ATCATTACGC GCGACGCCCG CTCTACCACA GCCGCGAACA CGGCTACAGC GTGATTGCCA TGAGCTGGGG CCCAGGGCAG GGCACGCCGC TGCACGACCA CGATGCCATG TGGTGTGTGG AGGGAGTGTG GTTGGGCGAA CTGGAGATCA CCCGCTATGA ACTGCTGGAG CGCAACGGCG AGCGCTGCCG CTTCCGTCGC CATGCCGCGC TGCGCGGGGG CTGCGGCAGT GCCGGCAGCC TGATTCCGCC GCACGAGTAC CATACCCTGC GCAACGCCAG CGACGCGGCC CTGGCGATCT CGGTGCATGT GTATGAGGCA CCGATGGAGC GCGCCGCGGT GTTCGATCCG CTGGGCGGTG ACTGGTACCA GCGACGCATC CAGGCATTGC AGGCCGACCC GGCCTGA
|
Protein sequence | MNAGATRANA NIPLTMLRYS QDMDLQTSPF PPFRGRDRLI AAVDAAMTSG DAGRITADLQ LALQDAIADS RIELPECVHR PVGDHYARRP LYHSREHGYS VIAMSWGPGQ GTPLHDHDAM WCVEGVWLGE LEITRYELLE RNGERCRFRR HAALRGGCGS AGSLIPPHEY HTLRNASDAA LAISVHVYEA PMERAAVFDP LGGDWYQRRI QALQADPA
|
| |