Gene Smal_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0030 
Symbol 
ID6477506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp36026 
End bp36682 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID642729163 
Productcysteine dioxygenase type I 
Protein accessionYP_002026418 
Protein GI194363808 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.174778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000079419 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGCGG GCGCGACGCG CGCGAACGCC AACATTCCTT TAACCATGCT CCGCTACAGT 
CAGGACATGG ACCTGCAGAC TTCTCCGTTT CCGCCGTTCC GTGGTCGCGA TCGGTTGATC
GCCGCCGTCG ACGCGGCGAT GACCTCCGGT GATGCCGGGC GCATCACCGC CGACCTGCAG
TTGGCACTGC AGGACGCCAT CGCAGACAGC CGCATCGAAC TTCCCGAGTG CGTGCACCGT
CCGGTCGGTG ATCATTACGC GCGACGCCCG CTCTACCACA GCCGCGAACA CGGCTACAGC
GTGATTGCCA TGAGCTGGGG CCCAGGGCAG GGCACGCCGC TGCACGACCA CGATGCCATG
TGGTGTGTGG AGGGAGTGTG GTTGGGCGAA CTGGAGATCA CCCGCTATGA ACTGCTGGAG
CGCAACGGCG AGCGCTGCCG CTTCCGTCGC CATGCCGCGC TGCGCGGGGG CTGCGGCAGT
GCCGGCAGCC TGATTCCGCC GCACGAGTAC CATACCCTGC GCAACGCCAG CGACGCGGCC
CTGGCGATCT CGGTGCATGT GTATGAGGCA CCGATGGAGC GCGCCGCGGT GTTCGATCCG
CTGGGCGGTG ACTGGTACCA GCGACGCATC CAGGCATTGC AGGCCGACCC GGCCTGA
 
Protein sequence
MNAGATRANA NIPLTMLRYS QDMDLQTSPF PPFRGRDRLI AAVDAAMTSG DAGRITADLQ 
LALQDAIADS RIELPECVHR PVGDHYARRP LYHSREHGYS VIAMSWGPGQ GTPLHDHDAM
WCVEGVWLGE LEITRYELLE RNGERCRFRR HAALRGGCGS AGSLIPPHEY HTLRNASDAA
LAISVHVYEA PMERAAVFDP LGGDWYQRRI QALQADPA