Gene Smal_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0029 
Symbol 
ID6477505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp35272 
End bp35910 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID642729162 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_002026417 
Protein GI194363807 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.156241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000760103 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAGCG CTGATCCGCG CCTGCGCGCG CTGTTGAAGC TGGCACCGGT GATTCCGGTG 
TACACCCCCG AAGACGTGAA TGAAGCGGTC GAAGTGGCCC AGGCGCTGTT CCGCGGCGGC
CTGCCGGTGA TCGAAGTAAC GCTGCGCACG CCGCAGGCAC TGGATGCGAT CAAGGCCATG
GTCGAGGCCG TGCCCGATGC CGTGATCGGC GCCGGCACCG TGCTCAACGC CGCACAAATG
CAGGCGGCAA AGCAGGCCGG TGCGCGTTTT GCCGTTTCCC CCGGTGCCAC GCCGGCGCTG
TATGCGGCCG CGCGCGATGC CGACCTGCCG TACCTGCCCG GTGCCGCCAC CGCCTCCGAC
CTGATCCTGG GCCTGGAGCA CGGCCAGGAC ACCTTCAAGT TCTTCCCGGC GGTGCAGGCC
GGTGGCGCCG CACTGCTGGC GGCCTGGCAC GGTCCGTTCG CCGATGTGCG CTTCTGCCCG
ACCGGCGGCA TCAGCACGCA GACCGCGCCG CAGTTCCTGC ACCTGCCCAA CGTGCTGTGC
GTGGGCGGCT CGTGGCTGAC CACCCCGGCG CTGCTGCAGA CCCGCGACTG GGATGCGATC
GAGCGCCTCG CCCGCGAGGC CTCGGTGTTG GCCGGCTGA
 
Protein sequence
MSSADPRLRA LLKLAPVIPV YTPEDVNEAV EVAQALFRGG LPVIEVTLRT PQALDAIKAM 
VEAVPDAVIG AGTVLNAAQM QAAKQAGARF AVSPGATPAL YAAARDADLP YLPGAATASD
LILGLEHGQD TFKFFPAVQA GGAALLAAWH GPFADVRFCP TGGISTQTAP QFLHLPNVLC
VGGSWLTTPA LLQTRDWDAI ERLAREASVL AG