Gene Smal_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0015 
Symbol 
ID6477491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp16088 
End bp17179 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID642729148 
ProductRadical SAM domain protein 
Protein accessionYP_002026403 
Protein GI194363793 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.811476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00130653 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTATTG CGATCAAGGG CCGAGGTTCC ACGTCCCATC TTGCCGGGCG CTTTGAAAGC 
ACCGTCAGCG AGGCGGTGGA CGATGGCTGG GCGGTCGACG AGAGCGAGGA GTTCCTTGCC
CCTCGCCTGC GCACCGAAGT GCGCGCCGAA ACCGCGCGCA GCATCATCAC CCGCAACAAC
TCGCCCGACG TCGGCTTCAG TCAATCGGTG AATCCCTACC GCGGTTGCGA GCACGGCTGC
TCCTACTGCT TCGCGCGCCC CTCGCATGCC TATCTGAACC TGTCGCCAGG CTTGGACTTC
GAGACCAAGC TGTTCGCCAA GACCAATGCG CCCCAGCTGC TGCGCAAGGA ACTGTCGAAA
CCGGGCTACG TGCCGCAACC GATCGCGCTG GGCATCAACA CCGATGCGTA CCAACCGATC
GAGCGCAAGT TCAAACTGAC CCGCCAGCTG ATTGAAGTGA TGCTGGAGAC CAAGCATCCC
TTCTCGCTGA TCACCAAGAA CGCGCTGGTC GAGCGCGATA TCGATCTGCT TGCGCCGCTG
GCCGCGGAGA ACCTGGTCAG CGTGCATTTC TCGGTGACCT CGCTGGACCC GCATCTCTCC
GCGAAGCTGG AACCGCGCGC GTCGGCGCCA CACGCACGGC TGCGCGCGAT GAAGCGTCTG
CATGAGGTCG GCATTCCGGT GGGCGTGATG GTGGCGCCGG TGATTCCGTG GATCAACGAC
AGCGAACTGG AAGCGGTGTT GGAGGCCGCA CACGACGCAG GTGCGAGCAC CGCCGGTTAT
GTGCTGCTGC GCCTGCCGCT TGAAGTGGCG CCGCTGTTCC GCGAGTGGCT GGACACCCAT
CATCCAGATC GCGCCGCACA TGTGATGAGT ACCATCCAGC AGCTGCGCGG CGGCAAGGAC
TACGACAGCC AGTTCGGCAC GCGCATGCGG GGCCAAGGCG TGTATGCCGA TCTGTTGAAC
AACCGCTTCA AGCTGGCGCG CAAACGTCTG GGCTTCAATG CGCAGAACAG CCATTGGCCG
AAGCTGGATT GCAGCCGGTT CCAGAAGCCG TTGCCACCGA GGAAGGATTC GCCGCAGGGG
TCGTTGTTCT GA
 
Protein sequence
MGIAIKGRGS TSHLAGRFES TVSEAVDDGW AVDESEEFLA PRLRTEVRAE TARSIITRNN 
SPDVGFSQSV NPYRGCEHGC SYCFARPSHA YLNLSPGLDF ETKLFAKTNA PQLLRKELSK
PGYVPQPIAL GINTDAYQPI ERKFKLTRQL IEVMLETKHP FSLITKNALV ERDIDLLAPL
AAENLVSVHF SVTSLDPHLS AKLEPRASAP HARLRAMKRL HEVGIPVGVM VAPVIPWIND
SELEAVLEAA HDAGASTAGY VLLRLPLEVA PLFREWLDTH HPDRAAHVMS TIQQLRGGKD
YDSQFGTRMR GQGVYADLLN NRFKLARKRL GFNAQNSHWP KLDCSRFQKP LPPRKDSPQG
SLF