Gene Smal_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0010 
Symbol 
ID6477486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp12428 
End bp12853 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID642729143 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002026398 
Protein GI194363788 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0041719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTCA GTAGTGGTAA CAGCGGCGGC CCCATGGCCG ACATCAACGT TACGCCCCTC 
GTGGACGTGA TGCTGGTGCT GCTGATCATC TTCATCATCA CGGCGCCCCT GATGTCCCAC
AAGGTCAAGG TGGATCTGCC GGAGGCCAAC CTGGTCCAGA AGCCGGACGA CACCAACGAT
CGCAAGGGTC CCATCACCCT GGCAGTCAAG GAAGATGGCT CGATCTACTG GAACGACGAA
GAAATCAACA AGCAGACTCT CGAGTCGCGC TTGGCGACCG CCGCCCAGCA GACCCCGCAG
CCGCCGTTGA ACCTGCGTGG TGACCGCACC ACCAAGATGC GCGTCATCAA CGAGATGACC
AAGATCGCGC AGGAACAGGG CATGCTGGAC GTCGGCTTCG TTGCGACCAA AGAAAAGGGG
CAATAA
 
Protein sequence
MAFSSGNSGG PMADINVTPL VDVMLVLLII FIITAPLMSH KVKVDLPEAN LVQKPDDTND 
RKGPITLAVK EDGSIYWNDE EINKQTLESR LATAAQQTPQ PPLNLRGDRT TKMRVINEMT
KIAQEQGMLD VGFVATKEKG Q