Gene Smal_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0003 
SymbolrecF 
ID6477479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3921 
End bp5015 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID642729136 
Productrecombination protein F 
Protein accessionYP_002026391 
Protein GI194363781 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0323054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GCCGCCTTGC CTTGCACCAA CTGCGTCGCT TCAATGCGGT GGAGCTCTCT 
CCGCAGCCGG GCTTGAACCT GCTGACCGGA GACAACGGCG CCGGCAAGAC CAGCATTCTT
GAGGCCCTGC ACCTGATGGC CTATGGGCGC AGCTTCCGCG GCCGGGTACG TGATGGTCTG
GTCCGTCAGG GCCAGGAAGC GTTGGAGATC TTCGTGGAAT GGGATGAACA GCGCGCCAGC
CACCCTCCTC ATCGGCGAAA GGCCGGTCTG CGCCACAGTG GCCAGGACTG GAAGGGACGA
TTGGATGGCG AAGACGTTGC CCAGCTCGGC AACCTCTGTG CTGCCTTGGC GGTGGTGACC
TTTGAACCAG GCAGCCACGC ACTGGTCAGC GGGGGCGGCG AACCCCGCCG CCGATTCCTC
GATTGGGGCT TGTTCCACGT GGAACCGGAT TTTCTATCCC TGTGGCGCCG CTACTCCCGG
GCGCTCAAGC AACGCAATGC ACTGCTCAAA CAGGGCGGGC CTTCGCGGAT GCTGGATACC
TGGGACCACG AGCTGGCCGA GGCAGGCGAA CCGCTGACCA GCCGCCGCCA GCACTATCTG
GAACGGCTGC AGCAACGGAC CGTGGCACTT GCGGCGGAAC TGGCTCCCCA GCTGGGTATC
CAGGCGATGG AACTGAGTCC GGGCTGGCGT CGCCACGAGT TGCCGTTGGC CGATGCGCTG
CTGCTGGCCC GCGAACGCGA CCGGCAAGCG GGCTACACCT CCGTCGGGCC GCACCGGGCG
GACTGGAGCG TGGACTTCCA CAACATTCCT GGCCGTGATG CGCTGTCCCG TGGCCAGGCC
AAGCTGACAG CCCTGGCCTG CCTGCTGGCC CAGGCCGAAG ACTATGCGGA ACAGCGCGGG
GAATGGCCGG TCATCGCCCT GGATGACCTG GCCTCGGAGC TGGATCGTAC CCACCAGGCA
CGGGTACTGG AGCGCCTGCT CGGCGGGCCG GCCCAGATAT TCGTCACCGC CACCGAAACC
CCGGCGGCGC TGCAGGAGCT GACCCATATC GCCCGGTTCC ACGTGGAACA TGCACAGATC
GTGGCTGTGC CATAG
 
Protein sequence
MQIRRLALHQ LRRFNAVELS PQPGLNLLTG DNGAGKTSIL EALHLMAYGR SFRGRVRDGL 
VRQGQEALEI FVEWDEQRAS HPPHRRKAGL RHSGQDWKGR LDGEDVAQLG NLCAALAVVT
FEPGSHALVS GGGEPRRRFL DWGLFHVEPD FLSLWRRYSR ALKQRNALLK QGGPSRMLDT
WDHELAEAGE PLTSRRQHYL ERLQQRTVAL AAELAPQLGI QAMELSPGWR RHELPLADAL
LLARERDRQA GYTSVGPHRA DWSVDFHNIP GRDALSRGQA KLTALACLLA QAEDYAEQRG
EWPVIALDDL ASELDRTHQA RVLERLLGGP AQIFVTATET PAALQELTHI ARFHVEHAQI
VAVP