Gene Smal_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0002 
Symbol 
ID6477478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1823 
End bp2923 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID642729135 
ProductDNA polymerase III subunit beta 
Protein accessionYP_002026390 
Protein GI194363780 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.366013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA CACTGCAGCG CGAAGCCTTT CTCAAGCCGT TGGCACAGGT CGTCAACGTG 
GTCGAACGCC GCCAGACCCT TCCGGTTCTG GCCAATTTCC TGGTCCAGGT GCAGAACGGC
CAGCTGTCGC TGACCGGTAC CGATCTGGAA GTGGAAATGG TGTCGCGGAT CGCGGTTGAA
GATGCGCAGG ACGGCGAAAC CACGATCCCC GCCCGCAAGC TGTTTGAGAT CATCCGCGCC
CTGCCCGATG GCAGCCGGAT CACCGTCTCG CAGACCGGTG ACAAGATCAC CGTGCAGGCA
GGCCGCAGCC GCTTCACCCT GGCAACCCTG CCCTCCAACG ACTTCCCGTC GGTGGATGAA
GTGGAAGCCA CCGAGCGCGT TGCGATCGGC GAAGCGACCC TGAAGGAGCT GATCGAACGC
ACCGCGTTCG CGATGGCCCA GCAGGACGTG CGCTACTACC TCAACGGCCT GCTGTTCGAC
CTGCGTGGTG ATGCGCTGCG TACGGTCGCC ACTGACGGTC ATCGTCTGGC CCTGTGCGAA
ACCGATCTGG CCAAGCCCAG CGGTTCCAAG CGCCAGATCA TCGTGCCGCG CAAGGGCGTG
ACCGAGTTGC AGCGCCTGTT GGAAAGCGGC GACCGCGAGA TCGAGCTGGA AGTCGGCCGT
AGCCACGTGC GCGTCAAGCG CGACGATGTC ACCTTCACCT CGAAGTTGAT CGATGGCCGC
TTCCCGGACT ACGAAGCAGT GATCCCGATC GGCGCCGATC GCGAGGTCAA GGTGAACCGT
GAGTCGCTGC GTGCGTCGTT GCAGCGTGCG GCGATCCTGT CCAACGAGAA GTACCGCGGT
ATCCGCGTGG AAGTCTCGCC GGGCAACCTC AAGATCAGTG CGCACAACCC GGAGCAGGAA
GAGGCCCAGG AAGAGATCGA GGCGGACACC ACCGTCAGCG ACCTGGCCAT CGGCTTCAAC
GTGAACTACC TGCTGGATGC CCTGTCCGCC CTGCGCGACG AGGAAGTCAT CATCCAGCTG
CGCGATTCCA ACTCCTCGGC GCTGGTGCGT GAATCCAGCA GCGAGAAGTC GCGCCACGTG
GTGATGCCGC TGCGTCTCTG A
 
Protein sequence
MRFTLQREAF LKPLAQVVNV VERRQTLPVL ANFLVQVQNG QLSLTGTDLE VEMVSRIAVE 
DAQDGETTIP ARKLFEIIRA LPDGSRITVS QTGDKITVQA GRSRFTLATL PSNDFPSVDE
VEATERVAIG EATLKELIER TAFAMAQQDV RYYLNGLLFD LRGDALRTVA TDGHRLALCE
TDLAKPSGSK RQIIVPRKGV TELQRLLESG DREIELEVGR SHVRVKRDDV TFTSKLIDGR
FPDYEAVIPI GADREVKVNR ESLRASLQRA AILSNEKYRG IRVEVSPGNL KISAHNPEQE
EAQEEIEADT TVSDLAIGFN VNYLLDALSA LRDEEVIIQL RDSNSSALVR ESSSEKSRHV
VMPLRL