| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 6474940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 215 |
|---|
| End bp | 1546 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642729134 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_002026389 |
|---|
| Protein GI | 194363779 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.351926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCCT GGTCCCGTAG TCTCGAGCGC CTCGAAGCGG AGTTCCCGCC GGAAGACGTT
CACACCTGGT TGAAGCCACT GCAGGCCGAT CTGCGCGTGG ACAGCCTGGT GCTGTATGCA
CCGAATGCCT TCATCGTCGA CCAGGTACGC GAACTGTACC TGGCCCGGAT CCGCGAACTG
CTGGCCCACT TCGCCGGTTT CAGCGACGTT TTTCTTGAAA TCGGCTCGCG CCCGCGGCCC
GTGGAGGCGC AGAACGCGCC GTTTTCCACG CCGTCGGCAC ATGTTTCCAG CGAACCGCAG
GTACCGTTCG CCGGCAACCT GGACAATCAC TACACCTTCG CCAACTTCGT CGAAGGCCGC
AGCAACCAGC TGGGCCTGGC CGCTGCCTTC CAGGCGGCGC AGAAGCCGGG CGACCGTGCG
CACAATCCGC TGCTGCTGTA CGGAGGCACC GGCCTGGGCA AGACCCACCT GATGTTCGCC
GCCGGCAACG CCATGCGCCA GGCCAACCCG GGGGCGAAGG TGCTGTACCT GCGCTCGGAA
CAGTTCTTCA GCGCGATGAT CCGGGCCTTG CAGGAAAAGA CCATGGATCA GTTCAAGCGC
CAGTTCCAGC AGGTGGACGC GCTGCTGATC GATGACATCC AGTTCTTCGC CGGCAAGGAC
CGCACCCAGG AAGAGTTCTT CCACACCTTC AACGCGTTGT TCGATGGCAA GCAGCAGATC
ATCCTGACCT GCGACCGCTA TCCGCGCGAA GTTGAAGGCC TGGAAGCGCG CCTGAAGTCG
CGGCTTGCCT GGGGCCTGTC GGTCGCGATC GAACCGCCGG ACTTCGAGAC CCGCGCGGCG
ATCGTGCTGG CCAAGGCCCG CGAGCGCGGT GCCGAGATTC CCGATGATGT TGCGTTCCTG
ATCGCCAAGA AGATGCGCTC CAACGTGCGC GACCTCGAGG GCGCGCTGAA TACCCTGACC
GCTCGTGCCA ATTTCACCGG CCGTGCGATC ACCACTGAAT TCGCCCAGGA AACTCTGCGC
GATCTGCTGC GCGCCCAGCA GCAGGCGATC AGCATTCCCA ACATCCAGAA AACGGTTGCC
GACTACTACG GCCTGCAGAT CAAGGATCTG CTGTCCAAGC GCCGGACCCG TTCGCTGGCT
CGTCCGCGCC AGGTCGCCAT GGCCCTGACC AAGGAGCTGA CCGAGCACAG CCTGCCTGAG
ATCGGCGACG CCTTCGCCGG TCGCGACCAC ACCACGGTGC TGCATGCCTG CCGTCAGATC
CGCACCCTGA TGGAGGCCGA CGGCAAGCTC CGCGAGGACT GGGACAAGCT GATCCGGAAG
CTGAGCGAAT GA
|
|---|
| Protein sequence | MDAWSRSLER LEAEFPPEDV HTWLKPLQAD LRVDSLVLYA PNAFIVDQVR ELYLARIREL
LAHFAGFSDV FLEIGSRPRP VEAQNAPFST PSAHVSSEPQ VPFAGNLDNH YTFANFVEGR
SNQLGLAAAF QAAQKPGDRA HNPLLLYGGT GLGKTHLMFA AGNAMRQANP GAKVLYLRSE
QFFSAMIRAL QEKTMDQFKR QFQQVDALLI DDIQFFAGKD RTQEEFFHTF NALFDGKQQI
ILTCDRYPRE VEGLEARLKS RLAWGLSVAI EPPDFETRAA IVLAKARERG AEIPDDVAFL
IAKKMRSNVR DLEGALNTLT ARANFTGRAI TTEFAQETLR DLLRAQQQAI SIPNIQKTVA
DYYGLQIKDL LSKRRTRSLA RPRQVAMALT KELTEHSLPE IGDAFAGRDH TTVLHACRQI
RTLMEADGKL REDWDKLIRK LSE
|
|---|
| |