| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2346 |
|---|
| Symbol | |
|---|
| ID | 6459070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011061 |
|---|
| Strand | + |
|---|
| Start bp | 7224 |
|---|
| End bp | 8201 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642729077 |
|---|
| Product | P-type conjugative transfer ATPase TrbB |
|---|
| Protein accession | YP_002019691 |
|---|
| Protein GI | 194335125 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAC TGCGTACGGC TGTTGCCCCC ATTGTAGACT TCCTGGATGA TGACAACATC
GTTGAAATCA TGCTCAATCC TGACGGAGCC GTCTGGGTTG AGGAGTCGGG GCGCGGCATG
TACCGCACAT CAGTTGTCAT GGACCGCGAC AGCGCAGAGC GATTGATCCG CCTGGCAGCT
GCGGCAATGA ATTTCGAGAT AAACGAGAGG CGCCCATTTC TTTCTGCGAC CCTTCCAGGC
TGGAAGGCGC GTCTGCAGGC CTCTGTTCCC CCTATTGTTT CCTCTCCGGT TTTTGCGCTG
CGAAAACCTC CCTCAACGGT ATTTACGCTG CAGGACTATG TGGAACGCAG GGTCATGACG
CCGGCGCAGG CATCCCTGCT TGAGCAGGCA GTGCGCCGGA AGCGCAATAT CGTCATCGGC
GGAGGCACGG GGTCGGGAAA GACCACCCTT GGTAATGCCC TCCTGCAGGT CGTTGCCGAC
ACTGATGACC GTGTCTACCT GGTGGAGGAC AGCACCGAGC TGCAGTGCCG GGCTGAAAAC
ATGGTGCAGG TCCTGGTGCA GCCACCCATT TACACCCATC AGCAGGCCAT CATGGATGCC
ATGCGCTTCA GGCCTGACAG GATTATTGTC GGTGAAGTGC GCGACGGTGC CGCCCTGGAG
CTGCTCAAGG CCTGGAATAC CGGTCATCCC GGCGGTATAG CGACGATACA CGCCAATCAT
GCCGCCGCCA TTCTCGACCG TTTCGTGCAG CTGTGTGAGG AGATTGTGCA TGCGGCACCG
AAATACCTGA TTGCCGAAGC AGTTGATATC TGTGTGCATA TCCAGCGGGA TCATCATCAT
CCTGCCGGTC GTGTGGTCAG CGACATCTGC ATGGTGTCAG GTCTTGACCC GCGGGGCGGA
TGGCTGCTGG AGCCGATAGG TGAAGAGGCC TGTCCGGAAT CTGTTCATGA ATACCTTTCA
GACCTGTCCC CTACGTGA
|
|---|
| Protein sequence | MASLRTAVAP IVDFLDDDNI VEIMLNPDGA VWVEESGRGM YRTSVVMDRD SAERLIRLAA
AAMNFEINER RPFLSATLPG WKARLQASVP PIVSSPVFAL RKPPSTVFTL QDYVERRVMT
PAQASLLEQA VRRKRNIVIG GGTGSGKTTL GNALLQVVAD TDDRVYLVED STELQCRAEN
MVQVLVQPPI YTHQQAIMDA MRFRPDRIIV GEVRDGAALE LLKAWNTGHP GGIATIHANH
AAAILDRFVQ LCEEIVHAAP KYLIAEAVDI CVHIQRDHHH PAGRVVSDIC MVSGLDPRGG
WLLEPIGEEA CPESVHEYLS DLSPT
|
|---|
| |