Gene Paes_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2344 
Symbol 
ID6459019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011061 
Strand
Start bp4374 
End bp6545 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content56% 
IMG OID642729075 
Productconjugal transfer coupling protein TraG 
Protein accessionYP_002019689 
Protein GI194335123 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3505] Type IV secretory pathway, VirD4 components 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.743545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA AACGAGCTGT CCACGTCTTT TACGGTCACG TTGCAACCGG GCTCCTGTTT 
ATGCTGTTGG GAACCTGGGC GGCAACACAG TATGTCGCGT TTCTGCTTGG ATACCAGCCG
CAGCTGGGAG AACCGCTGAT GATCATCGGC GGATACCCCG TTTATGAACC ATGGGCATGG
ATGTTCTGGT CCTATCATTT TGAACCCTAT GCACCGCATG TATTCGAGTA TGCAAGCCGG
ATCACCTATG CGAGTTTTTT TGCCATGGCA GGAGTCATGG TTGTGCTCTC GATTCTCAGG
GCGAAAAGAC AGCGGCAGGC AGGTACGTAC GGTACCGCAC GCTGGGCCAC GGAAAAAGAG
CTTGACGAGG CGGGTATCCT TGCTGAAGAG GGGATTGTGC TTGCCCAGAC CAGGGATGCA
CGGTATGCGT CTGCAGTCAG CAGACACAAC GGTGAAGCAG AGGTCAAATG GGTCATGAAA
AAACCGGGTG CGGCCATCCT TCGTCATAAC GGCCCTGAAC ACGTGTTCTG CTTTGCTCCG
ACGCGCTCAG GCAAAGGGGT GGGACTGGTC ATACCTACAC TGCTTGCCTG GAAAGGCAGC
TGTGTCGTCT ACGATATCAA AAAAGAGAAC TGGGCTGCGA CAGCAGGATG GAGACGTCAG
TTCTCACACT GCTGGTGCTT CGAGCCCACC TCTCCCCATT CCGTTCGGTT CAACCCGCTG
ATGGAGATAC GGCAGGGAGA CAACGAGGTG CGGGATGTGC AGAATGTCGC TGATATCCTT
GTCGATCCTG AAGGTGTCAA GGACCGTCTG GACCACTGGG AAAAAACCGG TCATGCGCTG
CTTGTCGGGG CAATCCTGCA TGTGCTCTAT GCTGAAGAAG ACAAGACGCT TTCAGGAGTA
GCCGGTTTTC TTGCCAACCC GGGCCGCAGC ATCGAAGAAA CGCTGGGAAT GATGCTGTCC
CATCACCACC TGGAAGGACA TCCCCATCCG GTCGTGGCGT CCTGTGCTCG GGAAATGCTC
AACAAAAGTG AAAACGAGCT GTCGGGTGTG CTGTCCACCG CCATGAGCTT TCTCGGCCTC
TACCGGGACC CGGTGATAGC ACGCAGCACT GCGGTATCTG ATTTCCGGAT CAGTGACCTG
ATGCAGGGCG ACAGGCCGGT GAGCCTCTAC CTGGTTGTCC CTCCTTCGGA TATCGACCGC
ACCAAGCCGC TTATACGGCT CATGCTCAAC CAGATGGGAC GACGGCTGAC GGAGAAAATA
GGGTTTGGAA AGAAGCATTA CCGTCACCGT CTGCTCATGA TGCTCGATGA GTTTCCGAGT
CTTGGCAGGC TGGGTTTTTA CGAGACAGAG CTGGCCTACA TGGCAGGCTA CGGCATCAAG
TGCATCATGA TCGCCCAGTC CCTCAACCAG ATCGAGAAGG TCTACGGGCA GAACAATGCC
ATCCTTGACA ATTCCCATGT GCGTATCACC TACGGAGCAC TCGATGAACG GACCGCCAAA
CGCATATCTG ATCTGCTCGG GCAGGCGACG GAAAAACGGC AGCAGCTCAA TTATGCAGGA
AATCGTCTCG CGCCATGGCT GGGCCACGTC ATGCAGTCGG AGCAGGAGAG CCCCCGTCCG
CTCCTGACGC CGGGAGAAAT CCTTCAGCTG CCCGGCGACG ATGCGCTGGT CATGATAGGA
GGTCTTCCTC CATACCGGGC GAAGAAGCTG ATGTACTACC AGGACAGACG GTTCGAGGGG
ATGGCTTGGA GGCCGGCGCC CGATACACCA GAGGAACAGC AGAAAGAGCT CCCTGAACAC
GTTGCGCCGC CAGCCTGGAT GGATTATGCA TCTGAAAGAA ATGAAACGCG TTATGATACT
TCTTATATTG ACGCATCAGG CTGTTCCTGC GGTGAAGGAT CTGGTCCGGG GATGAGCGCA
CATGATGATG ATGAATCTGA AGAGCATCAG GATCTGCAGC ATGATCATGA ACAGGAGCAC
GTGCTGGAGC GGATGCATCC GGAAGATGAA CTGTATGAAG GGATAATCCC TGAACATGCT
GAAGATGATG AAGCCTCAGT GCCCGGACAC CAGCAGCCCG CCGATGAGAG TGAACGCAGG
AGCAGGCGAC AGGACAGAAA CAGGACCATT GAACTGAGCA GAACGCCAGG AGGAGGAGAT
TTGCCGTTAT GA
 
Protein sequence
MKQKRAVHVF YGHVATGLLF MLLGTWAATQ YVAFLLGYQP QLGEPLMIIG GYPVYEPWAW 
MFWSYHFEPY APHVFEYASR ITYASFFAMA GVMVVLSILR AKRQRQAGTY GTARWATEKE
LDEAGILAEE GIVLAQTRDA RYASAVSRHN GEAEVKWVMK KPGAAILRHN GPEHVFCFAP
TRSGKGVGLV IPTLLAWKGS CVVYDIKKEN WAATAGWRRQ FSHCWCFEPT SPHSVRFNPL
MEIRQGDNEV RDVQNVADIL VDPEGVKDRL DHWEKTGHAL LVGAILHVLY AEEDKTLSGV
AGFLANPGRS IEETLGMMLS HHHLEGHPHP VVASCAREML NKSENELSGV LSTAMSFLGL
YRDPVIARST AVSDFRISDL MQGDRPVSLY LVVPPSDIDR TKPLIRLMLN QMGRRLTEKI
GFGKKHYRHR LLMMLDEFPS LGRLGFYETE LAYMAGYGIK CIMIAQSLNQ IEKVYGQNNA
ILDNSHVRIT YGALDERTAK RISDLLGQAT EKRQQLNYAG NRLAPWLGHV MQSEQESPRP
LLTPGEILQL PGDDALVMIG GLPPYRAKKL MYYQDRRFEG MAWRPAPDTP EEQQKELPEH
VAPPAWMDYA SERNETRYDT SYIDASGCSC GEGSGPGMSA HDDDESEEHQ DLQHDHEQEH
VLERMHPEDE LYEGIIPEHA EDDEASVPGH QQPADESERR SRRQDRNRTI ELSRTPGGGD
LPL