Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2344 |
Symbol | |
ID | 6459019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011061 |
Strand | + |
Start bp | 4374 |
End bp | 6545 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642729075 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_002019689 |
Protein GI | 194335123 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.743545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGA AACGAGCTGT CCACGTCTTT TACGGTCACG TTGCAACCGG GCTCCTGTTT ATGCTGTTGG GAACCTGGGC GGCAACACAG TATGTCGCGT TTCTGCTTGG ATACCAGCCG CAGCTGGGAG AACCGCTGAT GATCATCGGC GGATACCCCG TTTATGAACC ATGGGCATGG ATGTTCTGGT CCTATCATTT TGAACCCTAT GCACCGCATG TATTCGAGTA TGCAAGCCGG ATCACCTATG CGAGTTTTTT TGCCATGGCA GGAGTCATGG TTGTGCTCTC GATTCTCAGG GCGAAAAGAC AGCGGCAGGC AGGTACGTAC GGTACCGCAC GCTGGGCCAC GGAAAAAGAG CTTGACGAGG CGGGTATCCT TGCTGAAGAG GGGATTGTGC TTGCCCAGAC CAGGGATGCA CGGTATGCGT CTGCAGTCAG CAGACACAAC GGTGAAGCAG AGGTCAAATG GGTCATGAAA AAACCGGGTG CGGCCATCCT TCGTCATAAC GGCCCTGAAC ACGTGTTCTG CTTTGCTCCG ACGCGCTCAG GCAAAGGGGT GGGACTGGTC ATACCTACAC TGCTTGCCTG GAAAGGCAGC TGTGTCGTCT ACGATATCAA AAAAGAGAAC TGGGCTGCGA CAGCAGGATG GAGACGTCAG TTCTCACACT GCTGGTGCTT CGAGCCCACC TCTCCCCATT CCGTTCGGTT CAACCCGCTG ATGGAGATAC GGCAGGGAGA CAACGAGGTG CGGGATGTGC AGAATGTCGC TGATATCCTT GTCGATCCTG AAGGTGTCAA GGACCGTCTG GACCACTGGG AAAAAACCGG TCATGCGCTG CTTGTCGGGG CAATCCTGCA TGTGCTCTAT GCTGAAGAAG ACAAGACGCT TTCAGGAGTA GCCGGTTTTC TTGCCAACCC GGGCCGCAGC ATCGAAGAAA CGCTGGGAAT GATGCTGTCC CATCACCACC TGGAAGGACA TCCCCATCCG GTCGTGGCGT CCTGTGCTCG GGAAATGCTC AACAAAAGTG AAAACGAGCT GTCGGGTGTG CTGTCCACCG CCATGAGCTT TCTCGGCCTC TACCGGGACC CGGTGATAGC ACGCAGCACT GCGGTATCTG ATTTCCGGAT CAGTGACCTG ATGCAGGGCG ACAGGCCGGT GAGCCTCTAC CTGGTTGTCC CTCCTTCGGA TATCGACCGC ACCAAGCCGC TTATACGGCT CATGCTCAAC CAGATGGGAC GACGGCTGAC GGAGAAAATA GGGTTTGGAA AGAAGCATTA CCGTCACCGT CTGCTCATGA TGCTCGATGA GTTTCCGAGT CTTGGCAGGC TGGGTTTTTA CGAGACAGAG CTGGCCTACA TGGCAGGCTA CGGCATCAAG TGCATCATGA TCGCCCAGTC CCTCAACCAG ATCGAGAAGG TCTACGGGCA GAACAATGCC ATCCTTGACA ATTCCCATGT GCGTATCACC TACGGAGCAC TCGATGAACG GACCGCCAAA CGCATATCTG ATCTGCTCGG GCAGGCGACG GAAAAACGGC AGCAGCTCAA TTATGCAGGA AATCGTCTCG CGCCATGGCT GGGCCACGTC ATGCAGTCGG AGCAGGAGAG CCCCCGTCCG CTCCTGACGC CGGGAGAAAT CCTTCAGCTG CCCGGCGACG ATGCGCTGGT CATGATAGGA GGTCTTCCTC CATACCGGGC GAAGAAGCTG ATGTACTACC AGGACAGACG GTTCGAGGGG ATGGCTTGGA GGCCGGCGCC CGATACACCA GAGGAACAGC AGAAAGAGCT CCCTGAACAC GTTGCGCCGC CAGCCTGGAT GGATTATGCA TCTGAAAGAA ATGAAACGCG TTATGATACT TCTTATATTG ACGCATCAGG CTGTTCCTGC GGTGAAGGAT CTGGTCCGGG GATGAGCGCA CATGATGATG ATGAATCTGA AGAGCATCAG GATCTGCAGC ATGATCATGA ACAGGAGCAC GTGCTGGAGC GGATGCATCC GGAAGATGAA CTGTATGAAG GGATAATCCC TGAACATGCT GAAGATGATG AAGCCTCAGT GCCCGGACAC CAGCAGCCCG CCGATGAGAG TGAACGCAGG AGCAGGCGAC AGGACAGAAA CAGGACCATT GAACTGAGCA GAACGCCAGG AGGAGGAGAT TTGCCGTTAT GA
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Protein sequence | MKQKRAVHVF YGHVATGLLF MLLGTWAATQ YVAFLLGYQP QLGEPLMIIG GYPVYEPWAW MFWSYHFEPY APHVFEYASR ITYASFFAMA GVMVVLSILR AKRQRQAGTY GTARWATEKE LDEAGILAEE GIVLAQTRDA RYASAVSRHN GEAEVKWVMK KPGAAILRHN GPEHVFCFAP TRSGKGVGLV IPTLLAWKGS CVVYDIKKEN WAATAGWRRQ FSHCWCFEPT SPHSVRFNPL MEIRQGDNEV RDVQNVADIL VDPEGVKDRL DHWEKTGHAL LVGAILHVLY AEEDKTLSGV AGFLANPGRS IEETLGMMLS HHHLEGHPHP VVASCAREML NKSENELSGV LSTAMSFLGL YRDPVIARST AVSDFRISDL MQGDRPVSLY LVVPPSDIDR TKPLIRLMLN QMGRRLTEKI GFGKKHYRHR LLMMLDEFPS LGRLGFYETE LAYMAGYGIK CIMIAQSLNQ IEKVYGQNNA ILDNSHVRIT YGALDERTAK RISDLLGQAT EKRQQLNYAG NRLAPWLGHV MQSEQESPRP LLTPGEILQL PGDDALVMIG GLPPYRAKKL MYYQDRRFEG MAWRPAPDTP EEQQKELPEH VAPPAWMDYA SERNETRYDT SYIDASGCSC GEGSGPGMSA HDDDESEEHQ DLQHDHEQEH VLERMHPEDE LYEGIIPEHA EDDEASVPGH QQPADESERR SRRQDRNRTI ELSRTPGGGD LPL
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