Gene Ppha_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2908 
Symbol 
ID6462194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2993993 
End bp2994451 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content52% 
IMG OID642729054 
Productprotein of unknown function DUF1232 
Protein accessionYP_002019668 
Protein GI194337874 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGAAC AGAAACAAAA CGCAAGTCAG GAACAGATGA AAACGACATT GGATGGAGCT 
ACACGCAGGG CAGAAGCACT GATAAAAAAC CCCCGGAAGA GAAACAAACT GCTTGATGCC
GCAGGCAAGG TAGCCTCTTC CGGGAAATAC GCCCTGCAAC TCTCAGGCAT AACCGAAAAA
ACAAAGACGC TGATCCGCAT GGTACGCAGC ACGGCCAACA GGGAGTACCT CGATACCCCC
TGGCAGACCA TTGTGCTCAT TAGCGCCGCC CTCATCTATT TTGTCTCTCC CTTCGACGCA
CTGGCTGACT TCCTCCCGCT TATCGGGTTT GTTGATGATG CCGCCATCAT TACAGCCCTC
TTTGCTTCAA TCAGCAAGGA TGTCGAAAAA TTCACCGCAT GGGAAACAAC AAAAGCAGCG
CCCGATACGG CAAGCATCAG CTCTGCGGAG CCGGAGTGA
 
Protein sequence
MTEQKQNASQ EQMKTTLDGA TRRAEALIKN PRKRNKLLDA AGKVASSGKY ALQLSGITEK 
TKTLIRMVRS TANREYLDTP WQTIVLISAA LIYFVSPFDA LADFLPLIGF VDDAAIITAL
FASISKDVEK FTAWETTKAA PDTASISSAE PE