| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2907 |
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| Symbol | |
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| ID | 6462047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2993175 |
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| End bp | 2993996 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642729053 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002019667 |
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| Protein GI | 194337873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACT CGAACCAGCC ATACAGTCCG GGGGGATTTC AGTTTATGCC CCCGGCAATT
AAAACCATCA TTATTATCAA TGTTGCCGTT TTTCTGCTGC AATTCTTTAC ACCATTGGGT
GCAATAATTC AAGCGCTCGG CGCACTCTGG CCAATCGGTT CCAGCAACTT CCAGCTCTGG
CAACCGCTGA CCTACATGTT TCTGCACGGC AATGGCACCC ATCTCTTCTT CAACATGTTC
GCCCTCTGGA TGTTCGGTGC TGAAATAGAA AATCAGTGGG GAACCCGGCA ATTCAACATC
TACTACTTTA CCTGTGGTAT CGGCGCTGCA ATCATCAACC TTCTGGCAAC CATAGGCGAT
CCCTATCCAA CCGTCGGCGC TTCCGGCGCC ATCTACGGCG TACTGCTCGC CTTCGGCATG
ATGTTCCCCA ACCGCTATAT TTTTCTCTAT TTCCTCTTCC CCGTCAAGGC AAAATATTTT
ATTGCCGGCT ACGCACTGAT CGAATTTATC TCCGGTTTCG GCAGCCGCGC CATGGGAAGC
GGCAGCAACG TTGCCCATTT TGCACACCTC GGTGGTATGC TGATCGGCTT CATCTACATT
ACCATCAAAC GAGCAGAGTG GTCGTTCTCC GGACTCTTCA GCAAAATCCG CCCCTCCGGC
AAAAAGAGAA GCGGTCCGCG CCTCCATACC CGGAACAGCA TAACACCACC GGTCTCCGAA
TCTGAAATCG ACGCCATACT CGACAAGATT TCCGAACGCG GCTATGGCTC ACTGACCGCA
GAAGAGCGAC GCAAACTGCT CAAAGCAGGC GGAAAAAAGT GA
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| Protein sequence | MNYSNQPYSP GGFQFMPPAI KTIIIINVAV FLLQFFTPLG AIIQALGALW PIGSSNFQLW
QPLTYMFLHG NGTHLFFNMF ALWMFGAEIE NQWGTRQFNI YYFTCGIGAA IINLLATIGD
PYPTVGASGA IYGVLLAFGM MFPNRYIFLY FLFPVKAKYF IAGYALIEFI SGFGSRAMGS
GSNVAHFAHL GGMLIGFIYI TIKRAEWSFS GLFSKIRPSG KKRSGPRLHT RNSITPPVSE
SEIDAILDKI SERGYGSLTA EERRKLLKAG GKK
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