| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2893 |
|---|
| Symbol | murC |
|---|
| ID | 6461857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2976410 |
|---|
| End bp | 2977849 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642729039 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_002019653 |
|---|
| Protein GI | 194337859 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.909893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGG GAAAAACAAA AAGTGTTCAT ATTGTCGGTG TTGGCGGCGC TGGAATGAGT
GCAATAGCCG AATTGCTGCT GAAGTCAGGG TTCAGGGTGA CGGGTTCGGA TCTTTCGTCT
GGTGAGGTGA CTGAAAAGCT TGCCGAGCAT GGGGCAATAA TTTATAAGGG GCATCGAGCT
GAGCAGGTCG CAGGTTCTGA TGTTGTTGTT TATTCTTCGG CCATACGGGC TGAGGATAAT
ATCGAACTGA TTGCCGCTGA GAAAGCTGGT ATTCCGGTCA TCAAGCGTGA CGAGATGCTT
GGTGAGCTGA TGCGCTATAC ATACGGCATA TGCATTGCGG GTACGCATGG GAAAACAACA
ACGACCGCCA TGATTGCTAC CATGCTGATT GAGTCGGATG AGTCGCCGAC GGTCATGATT
GGCGGTATCT CGGACTATCT GAAAGGCAGT ACCGTGGTTG GTGAGGGAAA ATATATGGTT
ATTGAGGCTG ACGAGTATGA TCGCGCCTTT TTGAAGCTGA CACCAACCAT TGCCGTTGTC
AATAGTCTTG AGTCCGAGCA TATGGATACT TATGGCACGC TTGATGAGCT GAAAGAGGCC
TTCGTTGCTT TTGCCAACAA AGTGCCTTTT TACGGGCGGG TGATCTGTTG CGTCGATTGG
CCGGAGATCA GAAAGATCAT GCCGAAGATG AATCGCCTCT GTACAACTTT TGGAATTGAT
GAGCCTGCCG ATGTTATGGC TTTTGATATT GTTCTCGATA ACCAGCATAC TACCTTTTCA
ATCAAGGCTT TTGGCCAGGA GTACCGGGAC GTCTCTCTTC AGGTTCCGGG GCGCCACAAT
GTGCTTAATG CCCTCGCAGC TTTTTCGACA GGTCTTGAGC TGGGTATCCT TCCTGAGCGA
CTGATTGCCG GGCTTGGTCG GTACAGTGGT ATGAGGCGGC GGTTTCAGGT AAAATATGAT
AATGGCCACG GTCTTATGGT TGTGGACGAT TATGCCCACC ATCCTACAGA GGTGAAGGCG
ACTGTCAGGG CAGCCAAAAG CGGATGGCGT GACTCCAGAA TCGTGGCGGT TTTTCAGCCA
CATCTCTTTT CCCGTACCCG GGAGTTTGCT CATGAATATG GCTGGGCACT CTCTCATGCG
GATATGGTCT ACGTGGCCGA TATTTATCCG GCGCGTGAAA AGGGAGTTGA TTATCCCGGT
GTCGATGGTG AGTTAATTGC GGACGCTGTC CGTAAGGCTG GAGGGAAACA TGTGGAGTTT
GTTGCGGATA TGCAAAATCT CTTTACTGCT CTCAAGGAGT GGTCAGTTAA TGGAAATATG
CTTCTTTTCA TGGGTGCCGG TGATATCACC CATCTTGCAA CAAGGGTTGC CAATTTCTGC
AGAGAGGGTG TTGCTGTTCA GGGCAATGAA GACTCCCAGT CGGGTTTTGC GGCGTCATGA
|
|---|
| Protein sequence | MELGKTKSVH IVGVGGAGMS AIAELLLKSG FRVTGSDLSS GEVTEKLAEH GAIIYKGHRA
EQVAGSDVVV YSSAIRAEDN IELIAAEKAG IPVIKRDEML GELMRYTYGI CIAGTHGKTT
TTAMIATMLI ESDESPTVMI GGISDYLKGS TVVGEGKYMV IEADEYDRAF LKLTPTIAVV
NSLESEHMDT YGTLDELKEA FVAFANKVPF YGRVICCVDW PEIRKIMPKM NRLCTTFGID
EPADVMAFDI VLDNQHTTFS IKAFGQEYRD VSLQVPGRHN VLNALAAFST GLELGILPER
LIAGLGRYSG MRRRFQVKYD NGHGLMVVDD YAHHPTEVKA TVRAAKSGWR DSRIVAVFQP
HLFSRTREFA HEYGWALSHA DMVYVADIYP AREKGVDYPG VDGELIADAV RKAGGKHVEF
VADMQNLFTA LKEWSVNGNM LLFMGAGDIT HLATRVANFC REGVAVQGNE DSQSGFAAS
|
|---|
| |