| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2877 |
|---|
| Symbol | |
|---|
| ID | 6461669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2961956 |
|---|
| End bp | 2963002 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642729022 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_002019637 |
|---|
| Protein GI | 194337843 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAC AGCGAATTTT AAGCGGAATG CGCCCTACCG GCAAACTCCA TCTCGGTCAT
TTTACCGGTG CCCTTGAAAG CTGGGTCGAG CAGCAGAATC AGCTTGACGA AACGGGTGCG
AGAGTCTATG AGACCTGCTT TCTCATTGCT GATTATCACA ACCTGACGAC CTCGCTTGAT
ACCAGCGAGA TTTATGCCAA CACGCTTGAT ATGCTGCTCG ACTGGCTGGC GGCTGGCGTT
GACCCTGAAA AAAGTCCCCT CTTCCGCCAG TCGCAGGTGA AGGAACATGC TGAACTCTTT
TTGATTTTTT CCATGCTGAT CACCTCTTCG CGTCTCGAAA GAAACCCGAC ACTGAAGGAG
CAGATACGTG ATCTGAATAT GGAGTCACTG GTATACGGTC ATCTCGGTTA CCCCGTTCTG
CAGGCGGCTG ATATCCTCCT CTACAAGGGG AACGTTGTTC CGGTAGGCGA AGATCAGATC
CCCCATGTAG AGATTACCCG TGAGGTCGCA CGCAAATTCA ACAATCACTT TCCTCACCCT
CTTCTGGGAG AGGTCTTTGC TGAACCGGAA CCAAAAATCA CAAAATTTTC CCGTCTGGTT
GGCCTCGATG GCAAAGCAAA GATGTCGAAG TCTCTTGGCA ATACCATTCT GCTCTCGGAC
GGCCCCGAAG AGGTGCTGAA AAAAATGCGC ACGGCGGTGA CGGATACACA GAAAATCCGC
AAAAACGATC CAGGGCATCC TGAAGTCTGC ACCGTTTTCA GTTATCATAA AAAATTTACC
CCGGAGGAAC AACTCTGCAG CATAGAGAGT GATTGCCGGG CAGGATCGCT TGGCTGCGTT
GACTGTAAAA AACTGTGTGC GGCAAATATT GCACAGGAGC TGGCTCCCCT GATTGAAAAA
CGCCGCTATT ATGAAGCACA CATGGAGCTG GTAAAAGAGA TTCTTCTTGA CGGCGAGGCC
AGGGCAAAGG TGATTGCCGG CCAGACCATG CAGGAGGTGA GAGCAGCCAT GAGGCTTGGC
GAAACAACCT GCAGTAACCA TCTGTAA
|
|---|
| Protein sequence | MGTQRILSGM RPTGKLHLGH FTGALESWVE QQNQLDETGA RVYETCFLIA DYHNLTTSLD
TSEIYANTLD MLLDWLAAGV DPEKSPLFRQ SQVKEHAELF LIFSMLITSS RLERNPTLKE
QIRDLNMESL VYGHLGYPVL QAADILLYKG NVVPVGEDQI PHVEITREVA RKFNNHFPHP
LLGEVFAEPE PKITKFSRLV GLDGKAKMSK SLGNTILLSD GPEEVLKKMR TAVTDTQKIR
KNDPGHPEVC TVFSYHKKFT PEEQLCSIES DCRAGSLGCV DCKKLCAANI AQELAPLIEK
RRYYEAHMEL VKEILLDGEA RAKVIAGQTM QEVRAAMRLG ETTCSNHL
|
|---|
| |