| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2854 |
|---|
| Symbol | |
|---|
| ID | 6461303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2943685 |
|---|
| End bp | 2944326 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642729002 |
|---|
| Product | cyclase family protein |
|---|
| Protein accession | YP_002019617 |
|---|
| Protein GI | 194337823 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCA TTGATCTGAG TCAGGTCATC AGCTCCGGGA TGCCCTGTTA TCCTGGCACT
CCCGGACCGC GGTTTCAGCA GCTCTCTTCC ATTGATGAGC ATGGTTTTGC CGAGCAGCTT
TTAACCATCT CTTCCCATAC CGGGACACAT GTTGATCTTC CGTCACATAT TCTTCCCTCA
GGCAGTTCGC TTGATGCGTT CACTATTGAG CAGTTTTCCG GAAAGGGAGT GGCGATTGAT
CTTCGCAGCC TGACAGACGG GTTGATTACG GTTGAGACTC TTTATCCATT CCGGGATCTC
ATTTATGAGA GTGAGTTTCT GCTGCTCTGT TCCGGGTGGA GCAAGTATTG GGGCTCGGCA
GCTTATTTTG AGGGTTACCC TCTGCTCACC TCTGATGCGG CTCTTTGGCT GAGCGATTTT
CCCTTGAAAG GGCTCGGAGT TGACATGATT TCTGTCGATT CTCCCGTATC CTGTGATTTT
CCCGTTCATA CACAATTGCT GCAAAACGGG ATACTCATTA TTGAGAATCT TGTATGTCCA
CCCTTGCTAT TGCATTCTTC TTTCATCTTT TGCAGCTTTC CTTTGAGAAT TGCCGGCGCT
GAAGCATCAC CCGTCAGAGC GGTTGCTTTG GTTGAGTGCT GA
|
|---|
| Protein sequence | MRVIDLSQVI SSGMPCYPGT PGPRFQQLSS IDEHGFAEQL LTISSHTGTH VDLPSHILPS
GSSLDAFTIE QFSGKGVAID LRSLTDGLIT VETLYPFRDL IYESEFLLLC SGWSKYWGSA
AYFEGYPLLT SDAALWLSDF PLKGLGVDMI SVDSPVSCDF PVHTQLLQNG ILIIENLVCP
PLLLHSSFIF CSFPLRIAGA EASPVRAVAL VEC
|
|---|
| |